RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PITPNC1Q9UKF7 332 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 EMCNQ9ULC0 261 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 CORINQ9Y5Q5 1042 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 TDGF1P13385 188 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 SHBQ15464 509 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 S1PR5Q9H228 398 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 FFAR1O14842 300 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 RAB29O14966 203 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 STAG3L2P0CL84 134 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 RGPD1P0DJD0 1748 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 PCMT1P22061 227 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 PSG6Q00889 435 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 DNLZQ5SXM8 178 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 C6orf201Q7Z4U5 140 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 OR4S1Q8NGB4 309 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 CCL4L1Q8NHW4 92 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 SLC25A43Q8WUT9 341 aaPredicted RBP8.73□□□□□ -1.01
CHD3-202ENST00000358181 SOSTQ9BQB4 213 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 KLK15Q9H2R5 256 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 A0A1W2PPE3 182 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 SMPD2O60906 423 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 DNAJB5O75953 348 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 EMDP50402 254 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 GFERP55789 205 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
CHD3-202ENST00000358181 SELENBP1Q13228 472 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 PROX2Q3B8N5 592 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 NUDCD2Q8WVJ2 157 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 RTN4IP1Q8WWV3 396 aaPredicted RBP8.73□□□□□ -1.01
CHD3-202ENST00000358181 MARVELD3Q96A59 401 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 ECM29Q5VYK3 1845 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 MFSD2BA6NFX1 497 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 NPIPB6E9PJ23 425 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 DSCR3O14972 297 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 FCARP24071 287 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 ERVS71-1P61550 626 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 ZNF56Q15929 161 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 SMN1Q16637 294 aaKnown RBP8.73□□□□□ -1.01
CHD3-202ENST00000358181 C1orf210Q8IVY1 113 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 CELF2-AS1Q8N7Q2 184 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 OR4D9Q8NGE8 314 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 CRYGNQ8WXF5 182 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 C20orf27Q9GZN8 174 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 NXT2Q9NPJ8 142 aaKnown RBP8.73□□□□□ -1.01
CHD3-202ENST00000358181 HS3ST3A1Q9Y663 406 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 HSPE1-MOB4S4R3N1 261 aa8.73□□□□□ -1.01
CHD3-202ENST00000358181 ALDOCP09972 364 aaKnown RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 ZNF735P0CB33 412 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 GPX3P22352 226 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 TSPAN31Q12999 210 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 ELAVL1Q15717 326 aaKnown RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 C9orf50Q5SZB4 431 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 RNF113BQ8IZP6 322 aaKnown RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 TBC1D29Q9UFV1 150 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 EGR1P18146 543 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 ZNF415Q09FC8 603 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 SNAI3Q3KNW1 292 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 OR52I1Q8NGK6 324 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 GNRHR2Q96P88 292 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 ZBP1Q9H171 429 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 GLIPR2Q9H4G4 154 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 TRAV38-1A0A0B4J264 116 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 RPL12P30050 165 aaKnown RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 CSF2RBP32927 897 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 PTGFRP43088 359 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 UBE2L3P68036 154 aaKnown RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 SP6Q3SY56 376 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 GPRIN2O60269 458 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 SUCLG1P53597 346 aaKnown RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 ALKAL1Q6UXT8 129 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 DUSP18Q8NEJ0 188 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 OR52M1Q8NGK5 317 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 SNRNP40Q96DI7 357 aaKnown RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 FKBP11Q9NYL4 201 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 ZNF658BQ4V348 819 aaPredicted RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 TP53RKQ96S44 253 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 KCNK15Q9H427 330 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 FAM189A1O60320 539 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 PMS2P2O95744 297 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 P01737 135 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 ATP5J2P56134 94 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 FOXF1Q12946 379 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 RHBDD2Q6NTF9 364 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 ZNF343Q6P1L6 599 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 LFNGQ8NES3 379 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 GNPNAT1Q96EK6 184 aaPredicted RBP8.72□□□□□ -1.01
CHD3-202ENST00000358181 GPR61Q9BZJ8 451 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 TREX1Q9NSU2 369 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 LAMB4A4D0S4 1761 aa8.72□□□□□ -1.01
CHD3-202ENST00000358181 B4E171 279 aa8.71□□□□□ -1.01
CHD3-202ENST00000358181 LAMTOR1Q6IAA8 161 aa8.71□□□□□ -1.01
CHD3-202ENST00000358181 C1orf162Q8NEQ5 155 aaPredicted RBP8.71□□□□□ -1.01
CHD3-202ENST00000358181 TM4SF18Q96CE8 201 aa8.71□□□□□ -1.01
CHD3-202ENST00000358181 ALG1L2C9J202 215 aa8.71□□□□□ -1.01
CHD3-202ENST00000358181 GPR6P46095 362 aaPredicted RBP8.71□□□□□ -1.01
CHD3-202ENST00000358181 MARCH1Q8TCQ1 289 aa8.71□□□□□ -1.01
CHD3-202ENST00000358181 PRO1933Q9H354 126 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms