RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ZBTB37Q5TC79 503 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 SIGIRRQ6IA17 410 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 Q6ZPA2 131 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 ZNRF1Q8ND25 227 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 OR11L1Q8NGX0 322 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 HAVCR2Q8TDQ0 301 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 LRRC29Q8WV35 223 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 NRIP2Q9BQI9 281 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 OPA3Q9H6K4 179 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 SMURF1Q9HCE7 757 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TMEM106BQ9NUM4 274 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 DAPK2Q9UIK4 370 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 FOXJ3Q9UPW0 622 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TANC2Q9HCD6 1990 aa3.37□□□□□ -1.87
LIG4-201ENST00000356922 TRAV1-2A0A0B4J238 106 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 IGHV4-61A0A0C4DH41 118 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 IFITM5A6NNB3 132 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SLC22A1O15245 554 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 PSPNO60542 156 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ALX3O95076 343 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 PGA5P0DJD9 388 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 TMEM225BP0DP42 221 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SRP9P49458 86 aaKnown RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 TIMM50Q3ZCQ8 353 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SLC22A6Q4U2R8 563 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 FAM209AQ5JX71 171 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 C1orf100Q5SVJ3 147 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 UTF1Q5T230 341 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 OLFML2AQ68BL7 652 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 GLIPR1L1Q6UWM5 242 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ASCL4Q6XD76 172 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ZNF671Q8TAW3 534 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 TNFAIP8L1Q8WVP5 186 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 C10orf35Q96D05 121 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 KCTD7Q96MP8 289 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SMR3AQ99954 134 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 DCUN1D5Q9BTE7 237 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 GSX2Q9BZM3 304 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 C14orf119Q9NWQ9 140 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CTSZQ9UBR2 303 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 OR5V1Q9UGF6 321 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 WIPI2Q9Y4P8 454 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 MAB21L2Q9Y586 359 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 RFPL4AA6NLU0 287 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SRRM5B3KS81 715 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 RFPL4AL1F8VTS6 287 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CTDSP2O14595 271 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 GEMIN2O14893 280 aaKnown RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 LDLRAD4O15165 306 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 KDM4BO94953 1096 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 GYPAP02724 150 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ALDOBP05062 364 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 PSG2P11465 335 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 PAX1P15863 534 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 RAB3BP20337 219 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 S100A1P23297 94 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ZFP36P26651 326 aaKnown RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 SERPINB10P48595 397 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 TMEM50BP56557 158 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 PRB3Q04118 309 aaPredicted RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 FAM53AQ6NSI3 398 aaPredicted RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 SFXN4Q6P4A7 337 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 BPIFB2Q8N4F0 458 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 DYNC2LI1Q8TCX1 351 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 DYRK2Q92630 601 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CPNE2Q96FN4 548 aaPredicted RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 TMEM246Q9BRR3 403 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 RTL8AQ9BWD3 113 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SHARPINQ9H0F6 387 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 DCSTAMPQ9H295 470 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ZMAT3Q9HA38 289 aaKnown RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 LIN7BQ9HAP6 207 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 HES4Q9HCC6 221 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CYSLTR2Q9NS75 346 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ING4Q9UNL4 249 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 KCNK7Q9Y2U2 307 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 V9GY05 133 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 TRAV39A0A0B4J263 110 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 VWC2LB2RUY7 222 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ARL6IP5O75915 188 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 GALP22466 123 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CFHR2P36980 270 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 MTNR1BP49286 362 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 LMO4P61968 165 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 IL24Q13007 206 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CNN3Q15417 329 aaKnown RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 TAF9Q16594 264 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 DGUOKQ16854 277 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 FIP1L1Q6UN15 594 aaKnown RBP3.36□□□□□ -1.87
LIG4-201ENST00000356922 CLEC2AQ6UVW9 174 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 ZNF841Q6ZN19 808 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CDH24Q86UP0 819 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 FAM216BQ8N7L0 139 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CELF2-AS1Q8N7Q2 184 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 TPRX1Q8N7U7 411 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 Q8TCH9 128 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 C10orf105Q8TEF2 133 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SLC25A46Q96AG3 418 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 SPSB1Q96BD6 273 aa3.36□□□□□ -1.87
LIG4-201ENST00000356922 CCL13Q99616 98 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms