RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 C11orf53Q8IXP5 236 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 MKXQ8IYA7 352 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 SPERTQ8NA61 448 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 CHST4Q8NCG5 386 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 RAB3CQ96E17 227 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 ZNF488Q96MN9 340 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 FAIMQ9NVQ4 179 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 TAS2R8Q9NYW2 309 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 DOPEY1Q5JWR5 2465 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 PKDREJQ9NTG1 2253 aa15.39■□□□□ 0.05
SMARCD3-202ENST00000356800 PLSCR5A0PG75 271 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 CENPXA8MT69 81 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 C3orf80F5H4A9 247 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 SOCS1O15524 211 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 GSTP1P09211 210 aaKnown RBP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 HIST1H1DP16402 221 aaKnown RBP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 TMEM50BP56557 158 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 SRSF1Q07955 248 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 DAZAP2Q15038 168 aaPredicted RBP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 NKPD1Q17RQ9 610 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 SPRNQ5BIV9 151 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 PLAC9Q5JTB6 97 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 PRAMEF6Q5VXH4 476 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 Q6ZTK2 550 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 DUSP18Q8NEJ0 188 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ELMOD3Q96FG2 381 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 NEDD4LQ96PU5 975 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 TLNRD1Q9H1K6 362 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ZMAT3Q9HA38 289 aaKnown RBP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 NKIRAS2Q9NYR9 191 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 HRNRQ86YZ3 2850 aaPredicted RBP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 CACNA1DQ01668 2161 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 TMEM235A6NFC5 223 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 CDIPTO14735 213 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 SPRY3O43610 288 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 SLC6A1P30531 599 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 SERPINF1P36955 418 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 CD200P41217 278 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ZNF81P51508 661 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ARL6IP1Q15041 203 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 MPPED2Q15777 294 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ELP2Q6IA86 826 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 FBXL14Q8N1E6 418 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ENKURQ8TC29 256 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ZNF581Q9P0T4 197 aa15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ELF5Q9UKW6 265 aaPredicted RBP15.38■□□□□ 0.05
SMARCD3-202ENST00000356800 ARFGEF3Q5TH69 2177 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 hCG_2014768A0A024R1R8 64 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 GNB3P16520 340 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 ACTBP60709 375 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 ACTG1P63261 375 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 GUCA2AQ02747 115 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 PNLIPRP3Q17RR3 467 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 PIGYQ3MUY2 71 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 ZNF672Q499Z4 452 aaPredicted RBP15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 ZNF826PQ6ZT77 177 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 OSR2Q8N2R0 312 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 CISD1Q9NZ45 108 aaKnown RBP15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 ZNF107Q9UII5 783 aaPredicted RBP15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 KCNK7Q9Y2U2 307 aa15.37■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM240BA0A1B0GVZ2 78 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 TRAPPC2LH3BP13 241 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 MFNGO00587 321 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 CYB5AP00167 134 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 IGHV1-46P01743 117 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 CSF1P09603 554 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 APOBEC3AP31941 199 aaPredicted RBP15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 BTCP35070 178 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 MST1LQ2TV78 715 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 FAM222BQ8WU58 562 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 ARHGAP5-AS1Q96IT6 56 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 IL36RNQ9UBH0 155 aa15.36■□□□□ 0.05
SMARCD3-202ENST00000356800 NAP1L6A6NFF2 107 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 VSTM5A8MXK1 200 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 BLVRBP30043 206 aaPredicted RBP15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 RBMXP38159 391 aaKnown RBP15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 RBM11P57052 281 aaKnown RBP15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 FGF12P61328 243 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 ERVK11-1P61568 191 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 TAF9Q16594 264 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 PCGF3Q3KNV8 242 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 NHLRC3Q5JS37 347 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 SIGIRRQ6IA17 410 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 MEGF10Q96KG7 1140 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 OR2V2Q96R30 315 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 RHOFQ9HBH0 211 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 HRASLSQ9HDD0 168 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 UFSP2Q9NUQ7 469 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 ST3GAL6Q9Y274 331 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 SERPINE3A8MV23 424 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 PRSS44E7EML9 344 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 GEMIN2O14893 280 aaKnown RBP15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 CA11O75493 328 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 PGA5P0DJD9 388 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 GABRR1P24046 479 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 MZT1Q08AG7 82 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 EFNB3Q15768 340 aa15.35■□□□□ 0.05
SMARCD3-202ENST00000356800 PLA1AQ53H76 456 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms