RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ERVK11-1P61568 191 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 RPS11P62280 158 aaKnown RBP eCLIP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 TPBGQ13641 420 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 MED22Q15528 200 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CR1LQ2VPA4 569 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 WDR25Q64LD2 544 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF773Q6PK81 442 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 FIP1L1Q6UN15 594 aaKnown RBP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ACP7Q6ZNF0 438 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF788Q6ZQV5 615 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 MKXQ8IYA7 352 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 MS4A15Q8N5U1 240 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 DEFB108BQ8NET1 73 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 OR4M2Q8NGB6 313 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 OR5D14Q8NGL3 314 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 OR13C5Q8NGS8 318 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ANGPTL6Q8NI99 470 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 GHSRQ92847 366 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 TMEM106AQ96A25 262 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 RHOVQ96L33 236 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CEP19Q96LK0 163 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 GAFA1Q96PS6 74 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 DERL3Q96Q80 235 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 OR5M11Q96RB7 305 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CCDC90BQ9GZT6 254 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 C19orf73Q9NVV2 129 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CTSZQ9UBR2 303 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CKLFQ9UBR5 152 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF222Q9UK12 451 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 FOXJ3Q9UPW0 622 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 LRBAP50851 2863 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 TEX15Q9BXT5 2789 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 IGHV2-70DA0A0C4DH43 119 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF879B4DU55 563 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 INAFM1C9JVW0 142 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 MAGEB3O15480 346 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 AKR7A2O43488 359 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ECDO95905 644 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 PF4P02776 101 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CPEP16870 476 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CELP19835 753 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 BDKRB2P30411 391 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 RBMXP38159 391 aaKnown RBP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 MAP2K4P45985 399 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 MTCP1P56278 107 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ZP1P60852 638 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 SEC61A1P61619 476 aaKnown RBP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 IL13RA1P78552 427 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 LCN2P80188 198 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 SPIN3Q5JUX0 258 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 DDI2Q5TDH0 399 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 UBE2UQ5VVX9 321 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 DCAF12L2Q5VW00 463 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CD276Q5ZPR3 534 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 SFRP4Q6FHJ7 346 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ASPHD2Q6ICH7 369 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 LYPD2Q6UXB3 125 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ZNF841Q6ZN19 808 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 SLC25A26Q70HW3 274 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 C1QL2Q7Z5L3 287 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CALHM1Q8IU99 346 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CDH26Q8IXH8 852 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 NKAIN3Q8N8D7 197 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 C19orf18Q8NEA5 215 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 PXT1Q8NFP0 134 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 PHYHIPQ92561 330 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 SLAMF9Q96A28 289 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 DACT3Q96B18 629 aaPredicted RBP3.3□□□□□ -1.88
CNOT4-202ENST00000356162 SDSLQ96GA7 329 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 MED30Q96HR3 178 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 Q96M66 194 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 SHARPINQ9H0F6 387 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 LPAR2Q9HBW0 351 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 ACOT13Q9NPJ3 140 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 HIF1ANQ9NWT6 349 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CLN8Q9UBY8 286 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CDC42EP3Q9UKI2 254 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 INSIG2Q9Y5U4 225 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 CSMD1Q96PZ7 3565 aa3.3□□□□□ -1.88
CNOT4-202ENST00000356162 IGKV1D-17A0A075B6S4 117 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 LOC105371242A0A075B767 164 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 PNMA8CA0A1B0GUJ8 204 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 OR2AT4A6NND4 320 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 TRAPPC2LH3BP13 241 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 GABRPO00591 440 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 NDUFB3O43676 98 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 CRLF1O75462 422 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 PPIAL4GP0DN37 164 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 PSG2P11465 335 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 BCL3P20749 454 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 ZFP36P26651 326 aaKnown RBP3.29□□□□□ -1.88
CNOT4-202ENST00000356162 GDNFP39905 211 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 MTNR1BP49286 362 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 CAV3P56539 151 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 HOXA4Q00056 320 aaPredicted RBP3.29□□□□□ -1.88
CNOT4-202ENST00000356162 PAX2Q02962 417 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 PDZK1IP1Q13113 114 aa3.29□□□□□ -1.88
CNOT4-202ENST00000356162 SCGB2A2Q13296 93 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms