RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 FOXK1P85037 733 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 CNN3Q15417 329 aaKnown RBP12.47□□□□□ -0.41
SREBF1-202ENST00000355815 MPPED2Q15777 294 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF124Q15973 351 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 OR52N4Q8NGI2 321 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 HS3ST1O14792 307 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 GDF1P27539 372 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 SMAD4Q13485 552 aaKnown RBP12.47□□□□□ -0.41
SREBF1-202ENST00000355815 RAB31Q13636 194 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 ENDOGQ14249 297 aaKnown RBP12.47□□□□□ -0.41
SREBF1-202ENST00000355815 MOGAT2Q3SYC2 334 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 SIGLECL1Q8N7X8 197 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 EDAQ92838 391 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 UHRF2Q96PU4 802 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 TPPP3Q9BW30 176 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 ESRP2Q9H6T0 727 aaKnown RBP12.47□□□□□ -0.41
SREBF1-202ENST00000355815 GSN-AS1Q9NRJ2 163 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 RNF24Q9Y225 148 aa12.47□□□□□ -0.41
SREBF1-202ENST00000355815 TCF21O43680 179 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 DUS4LO95620 317 aaKnown RBP12.46□□□□□ -0.41
SREBF1-202ENST00000355815 FAHP16930 419 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 TCN2P20062 427 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 DHODHQ02127 395 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 S1PR5Q9H228 398 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 OR51M1Q9H341 326 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 ICAM5Q9UMF0 924 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 BPTFQ12830 3046 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 DOCK10Q96BY6 2186 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 NOTCH3Q9UM47 2321 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 ALG1L2C9J202 215 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 M0R143 59 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 ZXDAP98168 799 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF385CQ66K41 422 aaPredicted RBP12.46□□□□□ -0.41
SREBF1-202ENST00000355815 PRSS54Q6PEW0 395 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 Q7L0L9 218 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 ZNF100Q8IYN0 542 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 MAML2Q8IZL2 1156 aaPredicted RBP12.46□□□□□ -0.41
SREBF1-202ENST00000355815 OR5AS1Q8N127 324 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 NAA11Q9BSU3 229 aaPredicted RBP12.46□□□□□ -0.41
SREBF1-202ENST00000355815 VAMP8Q9BV40 100 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 CLCF1Q9UBD9 225 aa12.46□□□□□ -0.41
SREBF1-202ENST00000355815 GDF9O60383 454 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 LTBRP36941 435 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 EGR3Q06889 387 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.46□□□□□ -0.42
SREBF1-202ENST00000355815 RPS19BP1Q86WX3 136 aaKnown RBP12.46□□□□□ -0.42
SREBF1-202ENST00000355815 AGBL5Q8NDL9 886 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 OR5C1Q8NGR4 320 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF596Q8TC21 504 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 DYRK2Q92630 601 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 GNPNAT1Q96EK6 184 aaPredicted RBP12.46□□□□□ -0.42
SREBF1-202ENST00000355815 RTN4RQ9BZR6 473 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 PBOV1Q9GZY1 135 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 PAM16Q9Y3D7 125 aa12.46□□□□□ -0.42
SREBF1-202ENST00000355815 IGKV1D-42A0A075B6H8 117 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 SUMO1P63165 101 aaKnown RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 IQCJQ1A5X6 159 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 WFIKKN1Q96NZ8 548 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 HEATR1Q9H583 2144 aaKnown RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 KCNMB2Q9Y691 235 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 ADRA2CP18825 462 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 GALP22466 123 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 RBP2P50120 134 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF121P58317 390 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 ZP1P60852 638 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 IL10RAQ13651 578 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 CLEC18BQ6UXF7 455 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 PIK3IP1Q96FE7 263 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 SHARPINQ9H0F6 387 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF586Q9NXT0 402 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 SH3BGRL2Q9UJC5 107 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 PPP1R3CQ9UQK1 317 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 ARL2-SNX15V9GYD0 113 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 CDH23Q9H251 3354 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 AQP7P3A6NL99 342 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 SPRY1O43609 319 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 GATCO43716 136 aaKnown RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 FOLR3P41439 243 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 NOVA1P51513 510 aaKnown RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 HIST1H3AP68431 136 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 INSM1Q01101 510 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 SURF2Q15527 256 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 EMC4Q5J8M3 183 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 TMEM255AQ5JRV8 349 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 ZNF574Q6ZN55 896 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 MYPOPQ86VE0 399 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 SLC35G3Q8N808 338 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 HEYLQ9NQ87 328 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 HELZP42694 1942 aaKnown RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 WNK2Q9Y3S1 2297 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 PATE3B3GLJ2 98 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 MT-CO2P00403 227 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 TRGC2P03986 189 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 CD200P41217 278 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 DMBX1Q8NFW5 382 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 ATG101Q9BSB4 218 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 GPR87Q9BY21 358 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 AKIRIN1Q9H9L7 192 aaPredicted RBP12.45□□□□□ -0.42
SREBF1-202ENST00000355815 R4GMQ9 66 aa12.45□□□□□ -0.42
SREBF1-202ENST00000355815 RALGAPA1Q6GYQ0 2036 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms