RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 POLDIP2Q9Y2S7 368 aa13.61□□□□□ -0.23
PDLIM7-201ENST00000355572 DAPL1A0PJW8 107 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 CLPSL1A2RUU4 121 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 H0YAE9 185 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 H0YHG0 523 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 J3QLW9 94 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 K7N7A8 449 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 KNG1P01042 644 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 ZNF19P17023 458 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 BCL3P20749 454 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 COX7A1P24310 79 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 SMN1Q16637 294 aaKnown RBP13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 C17orf107Q6ZR85 190 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 FAM220AQ7Z4H9 259 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 LHFPL4Q7Z7J7 247 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 PQLC1Q8N2U9 271 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 RHOXF1Q8NHV9 184 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 PPP1R35Q8TAP8 253 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 CEP19Q96LK0 163 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 CITED1Q99966 193 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 VPREB3Q9UKI3 123 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 FAM96BQ9Y3D0 163 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 GMPPBQ9Y5P6 360 aa13.6□□□□□ -0.23
PDLIM7-201ENST00000355572 SLC1A7O00341 560 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 KCNAB3O43448 404 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 PSPNO60542 156 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 CRYBA1P05813 215 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 UBCP0CG48 685 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 JUNBP17275 347 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 ATF1P18846 271 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 AZGP1P25311 298 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 POU3F4P49335 361 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 FUT6P51993 359 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 SNU13P55769 128 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 PROK1P58294 105 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 ASPHD2Q6ICH7 369 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 ASCC1Q8N9N2 400 aaKnown RBP13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 ZSCAN4Q8NAM6 433 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 OR4F5Q8NH21 305 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 BORCS8Q96FH0 119 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 BEX1Q9HBH7 125 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 FAM118AQ9NWS6 357 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 SLC7A11Q9UPY5 501 aa13.59□□□□□ -0.23
PDLIM7-201ENST00000355572 MGAM2Q2M2H8 2515 aa13.58□□□□□ -0.23
PDLIM7-201ENST00000355572 C17orf98A8MV24 154 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 H3BUX3 64 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 WBP4O75554 376 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 ISG15P05161 165 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 HTR1AP08908 422 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 EEF1B2P24534 225 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 ALKBH1Q13686 389 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 LY6EQ16553 131 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 MEDAGQ5VYS4 303 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 NCR3LG1Q68D85 454 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 XAF1Q6GPH4 301 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 ACBD7Q8N6N7 88 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 BEND2Q8NDZ0 799 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 OR52I1Q8NGK6 324 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 PIFOQ8TCI5 191 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 RGP1Q92546 391 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 NKX3-1Q99801 234 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 ADI1Q9BV57 179 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 ALG8Q9BVK2 526 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 CHST6Q9GZX3 395 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 ERVK13-1Q9NX77 482 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 SIGLEC9Q9Y336 463 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 RNF114Q9Y508 228 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 WNK1Q9H4A3 2382 aa13.58□□□□□ -0.24
PDLIM7-201ENST00000355572 LOC100130705A0A1B0GUX0 176 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 ANKRD65E5RJM6 399 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 CHST1O43916 411 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 GATBO75879 557 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 MMP23AO75900 390 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 CLIC3O95833 236 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 GTF2A1P52655 376 aaPredicted RBP13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 ACTC1P68032 377 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 ACTA1P68133 377 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 ACSM1Q08AH1 577 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 GALEQ14376 348 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 TMEM244Q5VVB8 128 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 BAIAP2L2Q6UXY1 529 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 EGFL6Q8IUX8 553 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 OR4S1Q8NGB4 309 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 OR5D18Q8NGL1 313 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 OR13C9Q8NGT0 318 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 EMG1Q92979 244 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 SSX3Q99909 188 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 C9orf16Q9BUW7 83 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 DPAGT1Q9H3H5 408 aa13.57□□□□□ -0.24
PDLIM7-201ENST00000355572 ZFPL1O95159 310 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 HAND1O96004 215 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 CCR9P51686 369 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 EDDM3BP56851 147 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 BLMHQ13867 455 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 EDDM3AQ14507 147 aa13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 CNN3Q15417 329 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-201ENST00000355572 UTF1Q5T230 341 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms