RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 OR3A1P47881 315 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF774Q6NX45 483 aa13.26□□□□□ -0.29
LMX1B-201ENST00000355497 hADV38S2A0JD32 116 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 UBE2L3P68036 154 aaKnown RBP13.25□□□□□ -0.29
LMX1B-201ENST00000355497 Q6ZNB5 142 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 RFESDQ8TAC1 157 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 TSPAN32Q96QS1 320 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF426Q9BUY5 554 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 LRRC61Q9BV99 259 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 A0A1W2PR80 420 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 MED19A0JLT2 244 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-201ENST00000355497 RER1O15258 196 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 COX7A1P24310 79 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 CEACAM3P40198 252 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 CRYBB2P43320 205 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 RAG2P55895 527 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 PLA2G3Q9NZ20 509 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 FBXL17Q9UF56 701 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 OR2W5A6NFC9 320 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 RBFOX3A6NFN3 312 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-201ENST00000355497 PGFP49763 221 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 TNFAIP6P98066 277 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-201ENST00000355497 IL24Q13007 206 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 WDR74Q6RFH5 385 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF707Q96C28 371 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-201ENST00000355497 KDM3BQ7LBC6 1761 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 TSPAN12O95859 305 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 JMJD6Q6NYC1 403 aaPredicted RBP13.25□□□□□ -0.29
LMX1B-201ENST00000355497 DHRS13Q6UX07 377 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 LINC01465Q8N7H1 131 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 MCHR2Q969V1 340 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 C4orf45Q96LM5 186 aa13.25□□□□□ -0.29
LMX1B-201ENST00000355497 TRAV17A0A0B4J275 112 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 HLA-GP17693 338 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 DYNLT3P51808 116 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 HSD17B13Q7Z5P4 300 aaPredicted RBP13.24□□□□□ -0.29
LMX1B-201ENST00000355497 OR52L2PQ8NGH6 319 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 SLIRPQ9GZT3 109 aaKnown RBP13.24□□□□□ -0.29
LMX1B-201ENST00000355497 TECRQ9NZ01 308 aaKnown RBP13.24□□□□□ -0.29
LMX1B-201ENST00000355497 PDCD6O75340 191 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 CSN3P07498 182 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 SBK3P0C264 359 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 CD40P25942 277 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 C21orf62-AS1Q17RA5 79 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 HLA-DRB5Q30154 266 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 TDHQ8IZJ6 230 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 TM4SF19Q96DZ7 209 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 OR2A5Q96R48 311 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 GPR87Q9BY21 358 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 K7EQS6 105 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 DEDDO75618 318 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 OR4A8P0C604 315 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
LMX1B-201ENST00000355497 TNXAQ16473 311 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 UBALD2Q8IYN6 164 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 CXXC4Q9H2H0 198 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 A6NDN8 102 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 CD1BP29016 333 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 PABPC1L2AQ5JQF8 200 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 RSRP1Q9BUV0 290 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 AP4M1O00189 453 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 MYF5P13349 255 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 MRPL58Q14197 206 aaKnown RBP13.24□□□□□ -0.29
LMX1B-201ENST00000355497 ANKRD55Q3KP44 614 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 RBPMS2Q6ZRY4 209 aaKnown RBP13.24□□□□□ -0.29
LMX1B-201ENST00000355497 OR1L6Q8NGR2 347 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 DTD1Q8TEA8 209 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 SLC26A1Q9H2B4 701 aa13.24□□□□□ -0.29
LMX1B-201ENST00000355497 DNAJB12Q9NXW2 375 aaKnown RBP13.24□□□□□ -0.29
LMX1B-201ENST00000355497 FXYD1O00168 92 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 NKX2-2O95096 273 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 MEOX2P50222 304 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 TMEM240Q5SV17 173 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 TGIF2LYQ8IUE0 185 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 OR4D10Q8NGI6 311 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 MRGPRDQ8TDS7 321 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 CCL17Q92583 94 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 POM121Q96HA1 1249 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 TMEFF2Q9UIK5 374 aaPredicted RBP13.23□□□□□ -0.29
LMX1B-201ENST00000355497 SPTY2D1-AS1A0A0U1RR47 76 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 B2MP61769 119 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 SIGIRRQ6IA17 410 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 OR2T10Q8NGZ9 312 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 SRD5A3Q9H8P0 318 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF32P17041 273 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 ACP1P24666 158 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 P2RY1P47900 373 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 KLF3P57682 345 aaPredicted RBP13.23□□□□□ -0.29
LMX1B-201ENST00000355497 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 ABHD14AQ9BUJ0 271 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 ZNF275Q9NSD4 429 aaPredicted RBP13.23□□□□□ -0.29
LMX1B-201ENST00000355497 LMO7DNF2Z398 122 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 COX19Q49B96 90 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 DEGS2Q6QHC5 323 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 LYPD8Q6UX82 237 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 SPEM1Q8N4L4 309 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 OR4S2Q8NH73 311 aa13.23□□□□□ -0.29
LMX1B-201ENST00000355497 ADTRPQ96IZ2 230 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms