RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 TUBG1P23258 451 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ASCL1P50553 236 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 GFRA1P56159 465 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 RIPPLY1Q0D2K3 151 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 MS4A18Q3C1V0 323 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 EMC4Q5J8M3 183 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ATPAF1Q5TC12 328 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-203ENST00000354674 TEX38Q6PEX7 206 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 IL34Q6ZMJ4 242 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ZFP62Q8NB50 900 aaPredicted RBP8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ADAD2Q8NCV1 583 aaKnown RBP8.84□□□□□ -0.99
SYNE1-203ENST00000354674 OR1L6Q8NGR2 347 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 OR6N1Q8NGY5 312 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 ABHD5Q8WTS1 349 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 MIB2Q96AX9 1013 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 TTTY12Q9BZ98 90 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 TAF9BQ9HBM6 251 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 PLA2G2EQ9NZK7 142 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 RAB22AQ9UL26 194 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 STARD10Q9Y365 291 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 KPTNQ9Y664 436 aa8.84□□□□□ -0.99
SYNE1-203ENST00000354674 NPIPB13A6NJU9 1138 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 DHRS7CA6NNS2 312 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 NPIPB4C9JG80 1138 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 KLRC4-KLRK1H3BQV0 150 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 MFNGO00587 321 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ERCC1P07992 297 aaPredicted RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 AKAIN1P0CW23 69 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 HIST1H1CP16403 213 aaKnown RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 SERPINA2P20848 420 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 FGF7P21781 194 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 SLC2A5P22732 501 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 WNT5AP41221 380 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 OR3A1P47881 315 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 CRMP1Q14194 572 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 GUK1Q16774 197 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 H1FNTQ75WM6 255 aaPredicted RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 MEPCEQ7L2J0 689 aaKnown RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 SPACA3Q8IXA5 215 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 PAQR4Q8N4S7 273 aaPredicted RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 OR6K6Q8NGW6 343 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ZNF417Q8TAU3 575 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 CYTL1Q9NRR1 136 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 V9GY05 133 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 A0A1W2PNV4 684 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 H3BML4 177 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 F13BP05160 661 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 FCGR3AP08637 254 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 DVL1P1P54792 670 aaPredicted RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 UBE2KP61086 200 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ACTA2P62736 377 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 RBX1P62877 108 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ACTG2P63267 376 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ACTC1P68032 377 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ACTA1P68133 377 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ARG2P78540 354 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 LBHQ53QV2 105 aaPredicted RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 RAET1LQ5VY80 246 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 IGFL3Q6UXB1 125 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 P4HA3Q7Z4N8 544 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 BIVMQ86UB2 503 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 FAM185AQ8N0U4 392 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 SLC39A7Q92504 469 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 PELI1Q96FA3 418 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 TSPAN32Q96QS1 320 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 NMNAT2Q9BZQ4 307 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 CHST11Q9NPF2 352 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 B3GALT5Q9Y2C3 310 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 RIIAD1A6NNX1 92 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 H0YL77 283 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 K7EPK0 472 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 PLGP00747 810 aaPredicted RBP8.83□□□□□ -1
SYNE1-203ENST00000354674 PSMB6P28072 239 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 MEOX1P50221 254 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 CTXN1P60606 82 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 H3F3AP84243 136 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 HERPUD1Q15011 391 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 ZNF766Q5HY98 468 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 GALNTL5Q7Z4T8 443 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 FAM71E2Q8N5Q1 922 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 C11orf42Q8N5U0 333 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 SLC35G3Q8N808 338 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 NPEPL1Q8NDH3 523 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 MSL2Q9HCI7 577 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 C19orf12Q9NSK7 152 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 B4GALT7Q9UBV7 327 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 SELENOKQ9Y6D0 94 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 LOC400499M0QZD8 3231 aa8.83□□□□□ -1
SYNE1-203ENST00000354674 LOC102725191A0A1B0GVB3 256 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 TRAPPC6AO75865 159 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 RPLP1P05386 114 aaKnown RBP8.82□□□□□ -1
SYNE1-203ENST00000354674 CD5P06127 495 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 GDF1P27539 372 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 TMEM176BQ3YBM2 270 aaPredicted RBP8.82□□□□□ -1
SYNE1-203ENST00000354674 YRDCQ86U90 279 aaKnown RBP8.82□□□□□ -1
SYNE1-203ENST00000354674 GID4Q8IVV7 300 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 TMEM178AQ8NBL3 297 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 ZNF519Q8TB69 540 aa8.82□□□□□ -1
SYNE1-203ENST00000354674 KISS1RQ969F8 398 aaPredicted RBP8.82□□□□□ -1
SYNE1-203ENST00000354674 CYYR1Q96J86 154 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms