RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CTSBP07858 339 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 H2BFMP0C1H6 154 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 ATP6V0CP27449 155 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CCR5P51681 352 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CEBPGP53567 150 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 TMEM187Q14656 261 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 OR5AS1Q8N127 324 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 SLC35G3Q8N808 338 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 OR10A7Q8NGE5 316 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CLDND2Q8NHS1 167 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 ADOQ96SZ5 270 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 TBL1XR1Q9BZK7 514 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CTDSP1Q9GZU7 261 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 OR10A2Q9H208 303 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 BANF2Q9H503 90 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 HSF4Q9ULV5 492 aa9.04□□□□□ -0.96
CHRNA1-202ENST00000348749 CACNA1CQ13936 2221 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 IGKV3D-11A0A0A0MRZ8 115 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 KIR2DL5BA0A0G2JN68 375 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 KIR2DL5BA0A0G2JPC4 375 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 SPTY2D1-AS1A0A0U1RR47 76 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 LILRA5A6NI73 299 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 STMND1H3BQB6 276 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ST8SIA3O43173 380 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 XRCC2O43543 280 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 DUSP1P28562 367 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 SFTPDP35247 375 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 CAPZBP47756 277 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 OR3A4PP47883 348 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 EWSR1Q01844 656 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 IQCJQ1A5X6 159 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 HLA-DQA1Q5Y7H0 255 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 RTL6Q6ICC9 239 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 DPPA3Q6W0C5 159 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 CHRDL2Q6WN34 429 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 GALNTL5Q7Z4T8 443 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 SPRED2Q7Z698 418 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 KIR2DL5AQ8N109 375 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 FBXL14Q8N1E6 418 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 OR14L1PQ8NHC6 308 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF721Q8TF20 911 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 TMEM234Q8WY98 164 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 BADQ92934 168 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ACY3Q96HD9 319 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 BOD1Q96IK1 185 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 C18orf12Q96KH6 178 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ABHD14AQ9BUJ0 271 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 PBOV1Q9GZY1 135 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 RCL1Q9Y2P8 373 aaKnown RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 MRPS18CQ9Y3D5 142 aaKnown RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 LOC102723971A0A1B0GUV8 181 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 CDC14CA4D256 554 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 SERPINE3A8MV23 424 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF732B4DXR9 585 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ETV2O00321 342 aaPredicted RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 DIRAS3O95661 229 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 DDAH2O95865 285 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 CTSEP14091 401 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF20P17024 532 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF43P17038 809 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 DRD1P21728 446 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 CCKARP32238 428 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 FASLGP48023 281 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 CSNK1A1P48729 337 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ARL6IP1Q15041 203 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 C1orf194Q5T5A4 169 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 FAM90A2PQ658T7 463 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 KLHL24Q6TFL4 600 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 PARM1Q6UWI2 310 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 RNF144BQ7Z419 303 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 CARFQ8N187 725 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 SLC22A18ASQ8N1D0 253 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ZFP62Q8NB50 900 aaPredicted RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 GPR119Q8TDV5 335 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ASB10Q8WXI3 467 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 DAZLQ92904 295 aaKnown RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 KCNK17Q96T54 332 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 PYGO2Q9BRQ0 406 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ANGPTL4Q9BY76 406 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 FOXQ1Q9C009 403 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ZNF700Q9H0M5 742 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 OPN3Q9H1Y3 402 aaPredicted RBP9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 C11orf1Q9H5F2 150 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 PADI1Q9ULC6 663 aa9.03□□□□□ -0.96
CHRNA1-202ENST00000348749 ATG2BQ96BY7 2078 aa9.02□□□□□ -0.96
CHRNA1-202ENST00000348749 TRAV1-1A0A0B4J248 108 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 HSPA12AO43301 675 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 CRTAPO75718 401 aaPredicted RBP9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 SEMA4FO95754 770 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 NUDT14O95848 222 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 HPNP05981 417 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 MSX1P28360 303 aa9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 SUMO3P55854 103 aaPredicted RBP9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 RPL23AP62750 156 aaKnown RBP9.02□□□□□ -0.97
CHRNA1-202ENST00000348749 MRPS11P82912 194 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms