RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ETV7Q9Y603 341 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 A3GALT2U3KPV4 340 aa15.97■□□□□ 0.15
CHMP4A-201ENST00000347519 UNC79Q9P2D8 2635 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 IGHV3OR15-7A0A075B7D8 119 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 TMEM178BH3BS89 294 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 NXPH2O95156 264 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 IGHV4-39P01824 125 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 DAOP14920 347 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 PRKACAP17612 351 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 ELK1P19419 428 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 GLRA1P23415 457 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 DUSP1P28562 367 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 FGF12P61328 243 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 ZNF181Q2M3W8 571 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 ACP7Q6ZNF0 438 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 FAM58AQ8N1B3 248 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 OSR2Q8N2R0 312 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 OR6Q1Q8NGQ2 317 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 KCNG3Q8TAE7 436 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 EMG1Q92979 244 aaKnown RBP15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 MRI1Q9BV20 369 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 SELENOIQ9C0D9 397 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 RHBDL2Q9NX52 303 aa15.96■□□□□ 0.15
CHMP4A-201ENST00000347519 TACC2O95359 2948 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 CENPEQ02224 2701 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 RGS5O15539 181 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 ZNF780AO75290 641 aaPredicted RBP15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 F12P00748 615 aaPredicted RBP15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 CSTBP04080 98 aaKnown RBP15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 RAB6AP20340 208 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 EFNA4P52798 201 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 SCAND1P57086 179 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 RPS27AP62979 156 aaKnown RBP15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 MADCAM1Q13477 382 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 GPR176Q14439 515 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 MOGAT2Q3SYC2 334 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 SFRP4Q6FHJ7 346 aaPredicted RBP15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 RDH5Q92781 318 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 Q96M66 194 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 TMEM59Q9BXS4 323 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 CST11Q9H112 138 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 CXorf56Q9H5V9 222 aa15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 ZNF701Q9NV72 531 aaPredicted RBP15.95■□□□□ 0.14
CHMP4A-201ENST00000347519 SPG11Q96JI7 2443 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 GTF2F2P13984 249 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 IRF2P14316 349 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 CEBPDP49716 269 aaPredicted RBP15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 ART1P52961 327 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 RBM11P57052 281 aaKnown RBP15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 UBE2NLQ5JXB2 153 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 OR5T2Q8NGG2 359 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 OR51T1Q8NGJ9 327 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 PTX4Q96A99 478 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 TM2D1Q9BX74 207 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 ST3GAL6Q9Y274 331 aa15.94■□□□□ 0.14
CHMP4A-201ENST00000347519 GEMIN2O14893 280 aaKnown RBP15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 SOCS1O15524 211 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 TNFSF8P32971 234 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 CAPZA1P52907 286 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 TAF9Q16594 264 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 HFEQ30201 348 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 SIGIRRQ6IA17 410 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 CDH24Q86UP0 819 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 Q8IYB0 196 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 IZUMO1Q8IYV9 350 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 DEFB108BQ8NET1 73 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 OR4M1Q8NGD0 313 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 HPS1Q92902 700 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 ATG5Q9H1Y0 275 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 ABCG5Q9H222 651 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 NOTCH2Q04721 2471 aa15.93■□□□□ 0.14
CHMP4A-201ENST00000347519 LRRC30A6NM36 301 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 FOXI3A8MTJ6 420 aaPredicted RBP15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 APOA1P02647 267 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 AMY2BP19961 511 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 GABRR1P24046 479 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 PTH2RP49190 550 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 VEGFCP49767 419 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 MRPS11P82912 194 aaKnown RBP15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 NHLRC3Q5JS37 347 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 Q6P435 159 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 FAM89BQ8N5H3 189 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 MRPS24Q96EL2 167 aaKnown RBP15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 RHOFQ9HBH0 211 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 RASL12Q9NYN1 266 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 METRNQ9UJH8 293 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 PEX16Q9Y5Y5 336 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 NPTNQ9Y639 398 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 ITPR2Q14571 2701 aa15.92■□□□□ 0.14
CHMP4A-201ENST00000347519 FAM25AB3EWG3 89 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 FAM25CB3EWG5 89 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 FAM25GB3EWG6 89 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 RAB27BO00194 218 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 PSG2P11465 335 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 PAX1P15863 534 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 RANBP1P43487 201 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 TMEM50BP56557 158 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 TEX36Q5VZQ5 186 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 CNIH2Q6PI25 160 aa15.91■□□□□ 0.14
CHMP4A-201ENST00000347519 FAM90A1Q86YD7 464 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms