RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 ZNF429Q86V71 674 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 EIF4E3Q8N5X7 224 aaKnown RBP13.67□□□□□ -0.22
PTPRU-201ENST00000345512 C5orf49A4QMS7 147 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 OR6C6A6NF89 314 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 IGKV3-11P04433 115 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 CALCRP30988 508 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 LPAR6P43657 344 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 CCL7P80098 99 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 NCMAPQ5T1S8 102 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 STPG1Q5TH74 334 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 CST9LP1Q5W188 147 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 MRPL41Q8IXM3 137 aaKnown RBP13.67□□□□□ -0.22
PTPRU-201ENST00000345512 RASL10BQ96S79 203 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 FOXB1Q99853 325 aa13.67□□□□□ -0.22
PTPRU-201ENST00000345512 A0A1W2PPV4 95 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 MSGN1A6NI15 193 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF727A8MUV8 499 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF705FA8MVS1 300 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-201ENST00000345512 CDRT15L2A8MXV6 281 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF705DP0CH99 300 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF705BP0CI00 300 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ID4P47928 161 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 MECP2P51608 486 aaKnown RBP13.66□□□□□ -0.22
PTPRU-201ENST00000345512 DSCR4P56555 118 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-201ENST00000345512 IL13RA2Q14627 380 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 RAB39BQ96DA2 213 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 SSX3Q99909 188 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 A0A1W2PPE2 198 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 CBR3O75828 277 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ACTL6AO96019 429 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 SULT1A2P50226 295 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
PTPRU-201ENST00000345512 RAB35Q15286 201 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 GUSBP11Q6P575 273 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 TVP23CQ96ET8 276 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 SLC2A9Q9NRM0 540 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 PPP1R3CQ9UQK1 317 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 GEMIN2O14893 280 aaKnown RBP13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ADAM20O43506 726 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 CYB561P49447 251 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 FAM185AQ8N0U4 392 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 OR56B2PQ8NGI1 322 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 DYRK2Q92630 601 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 CABLES2Q9BTV7 478 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 C3orf85A0A1B0GTC6 90 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 PDCD6O75340 191 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 C1QL1O75973 258 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 ZNF787Q6DD87 383 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 PISDQ9UG56 409 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 LHFPL6Q9Y693 200 aa13.66□□□□□ -0.22
PTPRU-201ENST00000345512 IGKV1D-43A0A0B4J1Z2 117 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 DEGS1O15121 323 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 LAMTOR5O43504 91 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 RAB5AP20339 215 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 SULT1A1P50225 295 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 BAXQ07812 192 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 OR2T2Q6IF00 324 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 LIAT1Q6ZQX7 453 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 NTNG2Q96CW9 530 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 EDEM2Q9BV94 578 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 RTN4RQ9BZR6 473 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 TMEM14DPA8MWL7 114 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 CLEC12BQ2HXU8 276 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 PTCRAQ6ISU1 281 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-201ENST00000345512 NECAP1Q8NC96 275 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 OR6S1Q8NH40 331 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 LHX4Q969G2 390 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 UCK1Q9HA47 277 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 THSD7BQ9C0I4 1608 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-201ENST00000345512 AQP10Q96PS8 301 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 UCN2Q96RP3 112 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 PHF7Q9BWX1 381 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-201ENST00000345512 TMPRSS5Q9H3S3 457 aa13.65□□□□□ -0.22
PTPRU-201ENST00000345512 AP4M1O00189 453 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 NXPH2O95156 264 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 SERPINA7P05543 415 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 SMAD4Q13485 552 aaKnown RBP13.64□□□□□ -0.23
PTPRU-201ENST00000345512 OR5AS1Q8N127 324 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 CARFQ8N187 725 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 CHST5Q9GZS9 411 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 RCC2Q9P258 522 aaKnown RBP13.64□□□□□ -0.23
PTPRU-201ENST00000345512 BTBD17A6NE02 478 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 LTC4SQ16873 150 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 CADM4Q8NFZ8 388 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 ZNF251Q9BRH9 671 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 OBP2BQ9NPH6 170 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 A0A1B0GTI1 187 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 ADAM10O14672 748 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 MST1P26927 711 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 PSMB3P49720 205 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 ZNF610Q8N9Z0 462 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 OR10D4PQ8NGN7 298 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 RPUSD4Q96CM3 377 aaKnown RBP13.64□□□□□ -0.23
PTPRU-201ENST00000345512 MIOXQ9UGB7 285 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 UTRNP46939 3433 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 CCDC187A0A096LP49 1063 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 AQP7P3A6NL99 342 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 RNF212BA8MTL3 300 aa13.64□□□□□ -0.23
PTPRU-201ENST00000345512 GPM6AP51674 278 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms