RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 GBX2P52951 348 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-201ENST00000344376 RPL31P62899 125 aaKnown RBP13.2□□□□□ -0.3
ATG4B-201ENST00000344376 TTC23Q5W5X9 447 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 LHFPL2Q6ZUX7 228 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 SLC25A26Q70HW3 274 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 MKXQ8IYA7 352 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 Q8N7P7 452 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 OR52I1Q8NGK6 324 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 OR5D13Q8NGL4 314 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 TBC1D15Q8TC07 691 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 APH1BQ8WW43 257 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 SLAMF9Q96A28 289 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 COMMD4Q9H0A8 199 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 FAM234AQ9H0X4 552 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 MRPS18AQ9NVS2 196 aaKnown RBP13.2□□□□□ -0.3
ATG4B-201ENST00000344376 IGKV1-27A0A075B6S5 117 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 IRGMA1A4Y4 181 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 TMEM212A6NML5 194 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 OR4C45A6NMZ5 311 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 AZGP1P25311 298 aaKnown RBP13.2□□□□□ -0.3
ATG4B-201ENST00000344376 POU3F4P49335 361 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 MTCP1P56278 107 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 LRRC36Q1X8D7 754 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 ASCC1Q8N9N2 400 aaKnown RBP13.2□□□□□ -0.3
ATG4B-201ENST00000344376 CYGBQ8WWM9 190 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 OPALINQ96PE5 141 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 Q9H521 79 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 UNKLQ9H9P5 680 aaKnown RBP13.2□□□□□ -0.3
ATG4B-201ENST00000344376 TNFRSF19Q9NS68 423 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 MTCH1Q9NZJ7 389 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 RAB26Q9ULW5 256 aa13.2□□□□□ -0.3
ATG4B-201ENST00000344376 hCG_1809904A0A1W2PP81 198 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 A0A1W2PPE2 198 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 A0A1W2PR64 198 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 A0A1W2PRV1 198 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 RNASEK-C17orf49H0YIS7 233 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 NPFFO15130 113 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 CRYBA1P05813 215 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 CHRM2P08172 466 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 FBP1P09467 338 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 SETD9Q8NE22 299 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 EMG1Q92979 244 aaKnown RBP13.19□□□□□ -0.3
ATG4B-201ENST00000344376 ISG20L2Q9H9L3 353 aaKnown RBP13.19□□□□□ -0.3
ATG4B-201ENST00000344376 C19orf12Q9NSK7 152 aa13.19□□□□□ -0.3
ATG4B-201ENST00000344376 IGKV1-9A0A0C4DH69 117 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 INMTO95050 263 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 PAHP00439 452 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 TK1P04183 234 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 UBE2E1P51965 193 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 COL10A1Q03692 680 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 KLRD1Q13241 179 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 ZNF691Q5VV52 312 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 LDLRAD3Q86YD5 345 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 OR51A4Q8NGJ6 313 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 OR10AC1Q8NH08 325 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 OR5AK2Q8NH90 309 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 JAM3Q9BX67 310 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 DPAGT1Q9H3H5 408 aa13.18□□□□□ -0.3
ATG4B-201ENST00000344376 SF3B6Q9Y3B4 125 aaKnown RBP13.18□□□□□ -0.3
ATG4B-201ENST00000344376 BTBD17A6NE02 478 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
ATG4B-201ENST00000344376 WBP4O75554 376 aaKnown RBP13.17□□□□□ -0.3
ATG4B-201ENST00000344376 DCKP27707 260 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 AQP4P55087 323 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 PRB3Q04118 309 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-201ENST00000344376 ACSM1Q08AH1 577 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 MED21Q13503 144 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 SMN1Q16637 294 aaKnown RBP13.17□□□□□ -0.3
ATG4B-201ENST00000344376 TMPRSS11AQ6ZMR5 421 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 DHRSXQ8N5I4 330 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 TSEN15Q8WW01 171 aaKnown RBP13.17□□□□□ -0.3
ATG4B-201ENST00000344376 TNFRSF14Q92956 283 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 ZCCHC4Q9H5U6 513 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 FGF20Q9NP95 211 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-201ENST00000344376 GLS2Q9UI32 602 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 DHDHQ9UQ10 334 aa13.17□□□□□ -0.3
ATG4B-201ENST00000344376 TRBV2A0A0J9YWF9 115 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 A0A1W2PRD5 423 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 A0A1W2PRF3 423 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 A0A1W2PRM7 423 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 MEIOCA2RUB1 952 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 MAGEA13PA6NCF6 341 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 F8VVB4 439 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 F8VWA3 439 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 K7N7A8 449 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 ANGPTL7O43827 346 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 ZFPL1O95159 310 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 MT-ND2P03891 347 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 MYL12AP19105 171 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 DLX1P56177 255 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 RPL15P61313 204 aaKnown RBP13.16□□□□□ -0.3
ATG4B-201ENST00000344376 IL18R1Q13478 541 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 FAM58AQ8N1B3 248 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 OR4M1Q8NGD0 313 aa13.16□□□□□ -0.3
ATG4B-201ENST00000344376 CNIH3Q8TBE1 160 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms