RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 CAMKMTQ7Z624 323 aa12.21□□□□□ -0.45
TRIO-202ENST00000344204 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.45
TRIO-202ENST00000344204 MRPS2Q9Y399 296 aaKnown RBP12.21□□□□□ -0.45
TRIO-202ENST00000344204 AMER3Q8N944 861 aa12.21□□□□□ -0.45
TRIO-202ENST00000344204 ZNF740Q8NDX6 193 aa12.21□□□□□ -0.45
TRIO-202ENST00000344204 GTF3AQ92664 365 aaKnown RBP12.21□□□□□ -0.45
TRIO-202ENST00000344204 EPHX3Q9H6B9 360 aa12.21□□□□□ -0.45
TRIO-202ENST00000344204 DSCAML1Q8TD84 2053 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 NIT1Q86X76 327 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 ZNF595Q8IYB9 648 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 EXPH5Q8NEV8 1989 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 A0A0B4J293 547 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 H3BP45 60 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 BTG2P78543 158 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 SLC17A4Q9Y2C5 497 aa12.21□□□□□ -0.46
TRIO-202ENST00000344204 COA3Q9Y2R0 106 aaPredicted RBP12.21□□□□□ -0.46
TRIO-202ENST00000344204 DEGS1O15121 323 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 TAS1R1Q7RTX1 841 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 SDF2Q99470 211 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 HIST1H1DP16402 221 aaKnown RBP12.2□□□□□ -0.46
TRIO-202ENST00000344204 HERPUD1Q15011 391 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 NUDT10Q8NFP7 164 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 LYRM4Q9HD34 91 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 OR2A4O95047 310 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 NUDT11Q96G61 164 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 OR2A7Q96R45 310 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 PRSS37A4D1T9 235 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 ETHE1O95571 254 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 PCBP3P57721 371 aaKnown RBP12.2□□□□□ -0.46
TRIO-202ENST00000344204 CACFD1Q9UGQ2 172 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 H0YGG7 62 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 AGRNO00468 2067 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 NDUFA2O43678 99 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 PGA4P0DJD7 388 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 PGA5P0DJD9 388 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 ABHD17CQ6PCB6 329 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 MARCH3Q86UD3 253 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 OR52E1Q8NGJ3 308 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 TINAGQ9UJW2 476 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 ZNF750Q32MQ0 723 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 KMT5CQ86Y97 462 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 RIMS4Q9H426 269 aaPredicted RBP12.2□□□□□ -0.46
TRIO-202ENST00000344204 HLA-GP17693 338 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 NUTF2P61970 127 aaKnown RBP12.2□□□□□ -0.46
TRIO-202ENST00000344204 C19orf53Q9UNZ5 99 aaPredicted RBP12.2□□□□□ -0.46
TRIO-202ENST00000344204 TCTN2Q96GX1 697 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 S1PR5Q9H228 398 aa12.2□□□□□ -0.46
TRIO-202ENST00000344204 FAM234AQ9H0X4 552 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 HTR1DP28221 377 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 PMCHL1Q16048 86 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 A0A1W2PQU0 124 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 FAM69BQ5VUD6 431 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 ASCL3Q9NQ33 180 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 SLC2A4RGQ9NR83 387 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 PEF1Q9UBV8 284 aaKnown RBP12.19□□□□□ -0.46
TRIO-202ENST00000344204 SRPK3Q9UPE1 567 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 SNRPCP09234 159 aaKnown RBP12.19□□□□□ -0.46
TRIO-202ENST00000344204 PCGF1Q9BSM1 259 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 STARD5Q9NSY2 213 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 MED25Q71SY5 747 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 ADAD2Q8NCV1 583 aaKnown RBP12.19□□□□□ -0.46
TRIO-202ENST00000344204 OR51B6Q9H340 312 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 P4HTMQ9NXG6 502 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 KCND3Q9UK17 655 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 MTCH2Q9Y6C9 303 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 FFAR1O14842 300 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 DEFB110Q30KQ9 67 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 LHFPL2Q6ZUX7 228 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 MRPL37Q9BZE1 423 aaKnown RBP12.19□□□□□ -0.46
TRIO-202ENST00000344204 ENTPD2Q9Y5L3 495 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 ZNF253O75346 499 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 TMIGD3P0DMS9 266 aaPredicted RBP12.19□□□□□ -0.46
TRIO-202ENST00000344204 IRF2P14316 349 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 FHITP49789 147 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 ARRDC3Q96B67 414 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 CNTD2Q9H8S5 307 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 H2BFSP57053 126 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 OTOSQ8NHW6 89 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 ULBP2Q9BZM5 246 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 WDR13Q9H1Z4 485 aa12.19□□□□□ -0.46
TRIO-202ENST00000344204 OGG1O15527 345 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 PXNP49023 591 aaPredicted RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 EXT1Q16394 746 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 MDKP21741 143 aaPredicted RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 TXNIPQ9H3M7 391 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 FOLR2P14207 255 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 TMEM176BQ3YBM2 270 aaPredicted RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 OR52N5Q8NH56 324 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 LIPHQ8WWY8 451 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 GPA33Q99795 319 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 GJA4P35212 333 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 UBE2NP61088 152 aaKnown RBP12.18□□□□□ -0.46
TRIO-202ENST00000344204 AGERQ15109 404 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 ARIH2OSQ8N7S6 290 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 LPAR4Q99677 370 aa12.18□□□□□ -0.46
TRIO-202ENST00000344204 CA2P00918 260 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms