RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ANAPC10Q9UM13 185 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 GAB2Q9UQC2 676 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 WDR87Q6ZQQ6 2873 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 F5H5K5 113 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 SSSCA1O60232 199 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 GUSBP08236 651 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 COX5BP10606 129 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 GLIPR1P48060 266 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 GNMTQ14749 295 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 Q6ZSR6 202 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 ARHGEF39Q8N4T4 335 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 PLPP5Q8NEB5 264 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 C2orf88Q9BSF0 95 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 LANCL2Q9NS86 450 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 CFAP54Q96N23 3096 aa13.01□□□□□ -0.33
CLCN1-201ENST00000343257 CTSDP07339 412 aaPredicted RBP13□□□□□ -0.33
CLCN1-201ENST00000343257 FOLR1P15328 257 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 PLA2G5P39877 138 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 TMEM187Q14656 261 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 TMEM196Q5HYL7 178 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 LFNGQ8NES3 379 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 RHBDD1Q8TEB9 315 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 NEU1Q99519 415 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 TBX21Q9UL17 535 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 LHFPL6Q9Y693 200 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 ELOA3CA0A087WX78 387 aaPredicted RBP13□□□□□ -0.33
CLCN1-201ENST00000343257 IGSF23A1L1A6 192 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 C9J4A7 227 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 GZMBP10144 247 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 MPV17LQ2QL34 196 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 LRRC18Q8N456 261 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 KCNK17Q96T54 332 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 TMED3Q9Y3Q3 217 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 A8MWP6 167 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 CD55P08174 381 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 PGA3P0DJD8 388 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 ALDH3B1P43353 468 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 RABIFP47224 123 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 FGF8P55075 233 aaPredicted RBP13□□□□□ -0.33
CLCN1-201ENST00000343257 HSD11B2P80365 405 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 PPA1Q15181 289 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 DTX1Q86Y01 620 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 C1orf87Q8N0U7 546 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 OR5C1Q8NGR4 320 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 TMEM171Q8WVE6 324 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 DDA1Q9BW61 102 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 MRPL37Q9BZE1 423 aaKnown RBP13□□□□□ -0.33
CLCN1-201ENST00000343257 NAA60Q9H7X0 242 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 CERS4Q9HA82 394 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 CUTCQ9NTM9 273 aa13□□□□□ -0.33
CLCN1-201ENST00000343257 SPTBN5Q9NRC6 3674 aaKnown RBP12.99□□□□□ -0.33
CLCN1-201ENST00000343257 IGHV3-20A0A0C4DH32 117 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 NKX2-6A6NCS4 301 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 SPRY1O43609 319 aaPredicted RBP12.99□□□□□ -0.33
CLCN1-201ENST00000343257 NPIPB7O75200 414 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 HNRNPA1P09651 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLCN1-201ENST00000343257 EPHA1P21709 976 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 IGLV3-21P80748 117 aaPredicted RBP12.99□□□□□ -0.33
CLCN1-201ENST00000343257 OR13H1Q8NG92 308 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 OR14L1PQ8NHC6 308 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 M1APQ8TC57 530 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 GPR87Q9BY21 358 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 CBLN4Q9NTU7 201 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 H3BP45 60 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 MSTNO14793 375 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 CD200P41217 278 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 SUCLG1P53597 346 aaKnown RBP12.99□□□□□ -0.33
CLCN1-201ENST00000343257 HLA-DRB3P79483 266 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 DEGS2Q6QHC5 323 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 C9orf40Q8IXQ3 194 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 PGAM5Q96HS1 289 aa12.99□□□□□ -0.33
CLCN1-201ENST00000343257 FAM221BA6H8Z2 402 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 HLA-HP01893 362 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 ZNF25P17030 456 aaPredicted RBP12.98□□□□□ -0.33
CLCN1-201ENST00000343257 DUSP1P28562 367 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 LBX1P52954 281 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 CLRN1P58418 232 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
CLCN1-201ENST00000343257 GRINAQ7Z429 371 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 OR2C3Q8N628 320 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 SLC35G3Q8N808 338 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 ADIPOR1Q96A54 375 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 SLC46A1Q96NT5 459 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 CABLES2Q9BTV7 478 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 ANXA10Q9UJ72 324 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 FAM230AA0A1W2PPH8 454 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 AMBPP02760 352 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 HSD17B7P56937 341 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 GPR157Q5UAW9 335 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 LCN15Q6UWW0 184 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 H1FNTQ75WM6 255 aaPredicted RBP12.98□□□□□ -0.33
CLCN1-201ENST00000343257 SLC38A9Q8NBW4 561 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 TPSD1Q9BZJ3 242 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 CALHM2Q9HA72 323 aa12.98□□□□□ -0.33
CLCN1-201ENST00000343257 RPL36A-HNRNPH2H7BZ11 118 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 HOXB2P14652 356 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 FGF7P21781 194 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 SFTPDP35247 375 aa12.97□□□□□ -0.33
CLCN1-201ENST00000343257 DYNLT3P51808 116 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms