RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 CEACAM6P40199 344 aa13.74□□□□□ -0.21
CARMIL3-201ENST00000342740 IFITM3Q01628 133 aa13.74□□□□□ -0.21
CARMIL3-201ENST00000342740 THNSL2Q86YJ6 484 aa13.74□□□□□ -0.21
CARMIL3-201ENST00000342740 PSENENQ9NZ42 101 aa13.74□□□□□ -0.21
CARMIL3-201ENST00000342740 RPH3ALQ9UNE2 315 aa13.74□□□□□ -0.21
CARMIL3-201ENST00000342740 BCL2L11O43521 198 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 KLF3P57682 345 aaPredicted RBP13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 HIKESHIQ53FT3 197 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 HIST2H3PS2Q5TEC6 136 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 FBXW9Q5XUX1 488 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 TEX261Q6UWH6 196 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 LCN15Q6UWW0 184 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 SPICQ8N5J4 248 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 OR10V1Q8NGI7 309 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 DAZAP1Q96EP5 407 aaKnown RBP13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 CIB3Q96Q77 187 aaPredicted RBP13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 ZNF629Q9UEG4 869 aaPredicted RBP13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 U3KQ87 197 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 IGKV1D-42A0A075B6H8 117 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 MASP2O00187 686 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 GALR2O43603 387 aaPredicted RBP13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 CST7O76096 145 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 DUS4LO95620 317 aaKnown RBP13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 TGIF1Q15583 401 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 ZBTB37Q5TC79 503 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 SLC36A1Q7Z2H8 476 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 TMEM251Q8N6I4 163 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 CACNA1GO43497 2377 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 RPS16P62249 146 aaKnown RBP13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 LRRC29Q8WV35 223 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 PIK3IP1Q96FE7 263 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 PPP1R3EQ9H7J1 279 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 RAB18Q9NP72 206 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 ANXA10Q9UJ72 324 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 ZNF318Q5VUA4 2279 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 C17orf51A8MQB3 221 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 EFNB2P52799 333 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
CARMIL3-201ENST00000342740 CD1AP06126 327 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 NHLRC1Q6VVB1 395 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 KCNK17Q96T54 332 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 CHST5Q9GZS9 411 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 CACNA1HO95180 2353 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 CLEC18AA5D8T8 446 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 GEMIN2O14893 280 aaKnown RBP13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 LANCL1O43813 399 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 CLEC18CQ8NCF0 446 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 ST7LQ8TDW4 575 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 TAAR6Q96RI8 345 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 PCDHGA9Q9Y5G4 932 aaKnown RBP13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 M0R1X1 148 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 HEXAP06865 529 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 ERGIC1Q969X5 290 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 SLC35E1Q96K37 410 aa13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 NXF2Q9GZY0 626 aaKnown RBP13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 RCL1Q9Y2P8 373 aaKnown RBP13.72□□□□□ -0.21
CARMIL3-201ENST00000342740 IGLV1-36A0A0B4J1U3 117 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 MS4A18H0YCH9 400 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 NKX2-8O15522 239 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 NDUFB3O43676 98 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 PCOLCEQ15113 449 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 MS4A18Q3C1V0 323 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 KCNIP4Q6PIL6 250 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 CT45A6P0DMU7 189 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 CT45A5P0DMU8 189 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 CT45A7P0DMV0 189 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 ROM1Q03395 351 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 CT45A1Q5HYN5 189 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 ZFP62Q8NB50 900 aaPredicted RBP13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 CT45A3Q8NHU0 189 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 QPCTLQ9NXS2 382 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 TINAGQ9UJW2 476 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 NYNRINQ9P2P1 1898 aaKnown RBP13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 FAM90A27PA6NNH2 459 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 C3orf80F5H4A9 247 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 CDIPTO14735 213 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 ZIC2O95409 532 aaPredicted RBP13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 SULT1A3P0DMM9 295 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 SULT1A4P0DMN0 295 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 COX6A1P12074 109 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 ZNF485Q8NCK3 441 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 LHX4Q969G2 390 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 ST6GAL2Q96JF0 529 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 TMEM231Q9H6L2 316 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 KPTNQ9Y664 436 aa13.71□□□□□ -0.21
CARMIL3-201ENST00000342740 CD37P11049 281 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 ACKR3P25106 362 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 S100A7P31151 101 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 TNFAIP6P98066 277 aaPredicted RBP13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 LRRC10Q5BKY1 277 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 RPS4Y2Q8TD47 263 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 SLC26A1Q9H2B4 701 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 ESRP2Q9H6T0 727 aaKnown RBP13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 SLC7A10Q9NS82 523 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 CYB5R1Q9UHQ9 305 aa13.71□□□□□ -0.22
CARMIL3-201ENST00000342740 NUDT19A8MXV4 375 aa13.7□□□□□ -0.22
CARMIL3-201ENST00000342740 TGFBR3LH3BV60 316 aa13.7□□□□□ -0.22
CARMIL3-201ENST00000342740 THY1P04216 161 aa13.7□□□□□ -0.22
CARMIL3-201ENST00000342740 TAGLN2P37802 199 aaKnown RBP13.7□□□□□ -0.22
CARMIL3-201ENST00000342740 GABRA4P48169 554 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms