RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 EDARQ9UNE0 448 aa13.79□□□□□ -0.2
SNED1-202ENST00000342631 GCN1Q92616 2671 aaKnown RBP13.79□□□□□ -0.2
SNED1-202ENST00000342631 TANC2Q9HCD6 1990 aa13.79□□□□□ -0.2
SNED1-202ENST00000342631 DYSFO75923 2080 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 IGHV1-69-2A0A0G2JMI3 117 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 FAM25AB3EWG3 89 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 FAM25CB3EWG5 89 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 FAM25GB3EWG6 89 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 NXPH2O95156 264 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 ELK1P19419 428 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 TNFSF8P32971 234 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 SMIM21Q3B7S5 101 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 CMTM4Q8IZR5 234 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 FAM89BQ8N5H3 189 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 EMG1Q92979 244 aaKnown RBP13.78□□□□□ -0.2
SNED1-202ENST00000342631 Q96M66 194 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 KCNK15Q9H427 330 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 BANF2Q9H503 90 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 DIABLOQ9NR28 239 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 RBFOX1Q9NWB1 397 aaKnown RBP13.78□□□□□ -0.2
SNED1-202ENST00000342631 UTP20O75691 2785 aaKnown RBP13.78□□□□□ -0.2
SNED1-202ENST00000342631 HPXP02790 462 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 GLRA1P23415 457 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 EFNB2P52799 333 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 RBM11P57052 281 aaKnown RBP13.78□□□□□ -0.2
SNED1-202ENST00000342631 IL13RA2Q14627 380 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 HFEQ30201 348 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 SPIN3Q5JUX0 258 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 METAP1DQ6UB28 335 aaPredicted RBP13.78□□□□□ -0.2
SNED1-202ENST00000342631 BAIAP2L2Q6UXY1 529 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 GCSAMQ8N6F7 178 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 OR56B1Q8NGI3 324 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 S100ZQ8WXG8 99 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 DIRAS2Q96HU8 199 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 SELENOIQ9C0D9 397 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 LPAR5Q9H1C0 372 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 ATG5Q9H1Y0 275 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 SEBOXQ9HB31 216 aaPredicted RBP13.78□□□□□ -0.2
SNED1-202ENST00000342631 ST3GAL6Q9Y274 331 aa13.78□□□□□ -0.2
SNED1-202ENST00000342631 A0A1W2PP11 408 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 EIF4EP06730 217 aaKnown RBP13.77□□□□□ -0.21
SNED1-202ENST00000342631 ETV6P41212 452 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 SPANXN2Q5MJ10 180 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 ACP7Q6ZNF0 438 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 CCDC190Q86UF4 302 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 RDH5Q92781 318 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 TMEM106BQ9NUM4 274 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 GLS2Q9UI32 602 aa13.77□□□□□ -0.21
SNED1-202ENST00000342631 F8VVB4 439 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 F8VWA3 439 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 FSTL3O95633 263 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 F12P00748 615 aaPredicted RBP13.76□□□□□ -0.21
SNED1-202ENST00000342631 PRKACAP17612 351 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 PTBP1P26599 531 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNED1-202ENST00000342631 PITPNBP48739 271 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 EFNA4P52798 201 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 LSAMPQ13449 338 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 ZNF146Q15072 292 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 MPV17LQ2QL34 196 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 C15orf40Q8WUR7 153 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 ZNF488Q96MN9 340 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 PLEKHA6Q9Y2H5 1048 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 TMEM178BH3BS89 294 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 XRCC3O43542 346 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 KNG1P01042 644 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 NR4A2P43354 598 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 ZNF45Q02386 682 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 PLA2G7Q13093 441 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 ARL6IP1Q15041 203 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 ZNF787Q6DD87 383 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 CNIH2Q6PI25 160 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 CCL17Q92583 94 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 GAL3ST1Q99999 423 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 IFT22Q9H7X7 185 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 EXTL2Q9UBQ6 330 aa13.76□□□□□ -0.21
SNED1-202ENST00000342631 RAB27BO00194 218 aa13.75□□□□□ -0.21
SNED1-202ENST00000342631 PAX1P15863 534 aa13.75□□□□□ -0.21
SNED1-202ENST00000342631 MUC1P15941 1255 aaPredicted RBP13.75□□□□□ -0.21
SNED1-202ENST00000342631 CDKN1AP38936 164 aa13.75□□□□□ -0.21
SNED1-202ENST00000342631 MNDAP41218 407 aa13.75□□□□□ -0.21
SNED1-202ENST00000342631 SPACA1Q9HBV2 294 aa13.75□□□□□ -0.21
SNED1-202ENST00000342631 MYOZ1Q9NP98 299 aaPredicted RBP13.75□□□□□ -0.21
SNED1-202ENST00000342631 FASNP49327 2511 aaKnown RBP13.75□□□□□ -0.21
SNED1-202ENST00000342631 DCHS2Q6V1P9 2916 aa13.75□□□□□ -0.21
SNED1-202ENST00000342631 FABP12A6NFH5 140 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 DAOP14920 347 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 CDK2P24941 298 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 VEGFCP49767 419 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 TEX36Q5VZQ5 186 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 OR10R2Q8NGX6 335 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 WDR13Q9H1Z4 485 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 ZNF701Q9NV72 531 aaPredicted RBP13.74□□□□□ -0.21
SNED1-202ENST00000342631 NLKQ9UBE8 527 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 DNAJB11Q9UBS4 358 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 LRBAP50851 2863 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.74□□□□□ -0.21
SNED1-202ENST00000342631 SH2D1BO14796 132 aa13.74□□□□□ -0.21
SNED1-202ENST00000342631 GEMIN2O14893 280 aaKnown RBP13.74□□□□□ -0.21
SNED1-202ENST00000342631 CYB5R3P00387 301 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms