RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 BDH1Q02338 343 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 RIPPLY1Q0D2K3 151 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 PRAMEF5Q5TYX0 476 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 ZNF573Q86YE8 665 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 RNF148Q8N7C7 305 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 RP9Q8TA86 221 aaKnown RBP12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 OR51E1Q8TCB6 317 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 TEAD3Q99594 435 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 CHST6Q9GZX3 395 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 GPR84Q9NQS5 396 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 PAPOLBQ9NRJ5 636 aaKnown RBP12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 MRGBPQ9NV56 204 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 FAM206AQ9NX38 181 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 LINC00312Q9Y6C7 94 aa12.86□□□□□ -0.35
NECTIN1-202ENST00000340882 hADV38S2A0JD32 116 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 PSMD9O00233 223 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 RPLP1P05386 114 aaKnown RBP12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 HCCSP53701 268 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 GP2P55259 537 aaKnown RBP12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 PPP1R8Q12972 351 aaKnown RBP12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 ASRGL1Q7L266 308 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 OR5M8Q8NGP6 311 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 CHPT1Q8WUD6 406 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 OTULINQ96BN8 352 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 OR51V1Q9H2C8 321 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 DCLRE1BQ9H816 532 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 CMC2Q9NRP2 79 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 IL36RNQ9UBH0 155 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 POLDIP2Q9Y2S7 368 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 MOB4Q9Y3A3 225 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 LYVE1Q9Y5Y7 322 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 HSPE1-MOB4S4R3N1 261 aa12.85□□□□□ -0.35
NECTIN1-202ENST00000340882 A6NIN4 97 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 LEUTXA8MZ59 168 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 LY6LH3BQJ8 138 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 M0QZK8 103 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 INMTO95050 263 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 FABP3P05413 133 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 TPTE2P1Q5T6R2 138 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 ZBTB49Q6ZSB9 765 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 COMMD2Q86X83 199 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 IQCF1Q8N6M8 205 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 OR2T33Q8NG76 320 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 SNX22Q96L94 193 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 PBOV1Q9GZY1 135 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 ZNF286AQ9HBT8 521 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 FGFR1OP2Q9NVK5 253 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 MTCH1Q9NZJ7 389 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 NKX1-2Q9UD57 310 aaPredicted RBP12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 ENPP5Q9UJA9 477 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 FRAS1Q86XX4 4008 aa12.84□□□□□ -0.35
NECTIN1-202ENST00000340882 ARRDC5A6NEK1 342 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 RIIAD1A6NNX1 92 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 SERPINE3A8MV23 424 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 PRR32B1ATL7 298 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 GSC2O15499 205 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 PSPNO60542 156 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 LY86O95711 162 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 IFNGP01579 166 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 ZNF3P17036 446 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 HMGA2P52926 109 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 PSME3P61289 254 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 ZNF260Q3ZCT1 412 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 TMEM42Q69YG0 159 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 C5orf56Q8N8D9 126 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 GORASP2Q9H8Y8 452 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 BAIAP2Q9UQB8 552 aa12.83□□□□□ -0.36
NECTIN1-202ENST00000340882 TMEM269A0A1B0GVZ9 245 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A9PA6NNJ1 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 BUB1B-PAK6H3BSN5 160 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FRMD6-AS1P0C7T7 363 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A15PP0C7V4 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A13PP0C7W8 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A14PP0C7W9 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 FAM90A24PP0C7X0 464 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 ATP6V1B1P15313 513 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 MFGE8Q08431 387 aaPredicted RBP12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 GRK1Q15835 563 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 SAMD4BQ5PRF9 694 aaKnown RBP12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 HACD2Q6Y1H2 254 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 STPG2Q8N412 459 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 AQP11Q8NBQ7 271 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 ZNF596Q8TC21 504 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 EFCAB1Q9HAE3 211 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 EDA2RQ9HAV5 297 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 IL1RAPQ9NPH3 570 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 PCLOQ9Y6V0 5065 aa12.82□□□□□ -0.36
NECTIN1-202ENST00000340882 TNFRSF11BO00300 401 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 ALOX5APP20292 161 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 CDK2P24941 298 aa12.81□□□□□ -0.36
NECTIN1-202ENST00000340882 IL24Q13007 206 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms