RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 HOXD13P35453 343 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A11Q02978 314 aaKnown RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CLN3Q13286 438 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TMPRSS9Q7Z410 1059 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 H1FOOQ8IZA3 346 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 RPS4Y2Q8TD47 263 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CDS1Q92903 461 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SLAMF8Q9P0V8 285 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GIMAP2Q9UG22 337 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PIEZO1Q92508 2521 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM269A0A1B0GVZ9 245 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 NPIPB8E9PQR5 432 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR2A4O95047 310 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 FABP2P12104 132 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SPINT3P49223 89 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MGAT3Q09327 533 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 COL9A2Q14055 689 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ENTPD8Q5MY95 495 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 NPSR1Q6W5P4 371 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SLC35E3Q7Z769 313 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR13H1Q8NG92 308 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CASTOR1Q8WTX7 329 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR2A7Q96R45 310 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SMIM7Q9BQ49 75 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MARVELD1Q9BSK0 173 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM208Q9BTX3 173 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 FAM53CQ9NYF3 392 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 HS3ST2Q9Y278 367 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ZFP30Q9Y2G7 519 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 AMDHD2Q9Y303 409 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LOC102723996A0A087X1L8 192 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PRSS37A4D1T9 235 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF705GA8MUZ8 300 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM250H0YL14 139 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SLC16A7O60669 478 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GABRA3P34903 492 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 KIR3DL2P43630 455 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PTTG1IPP53801 180 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CLDN6P56747 220 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SLC37A1P57057 533 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF816Q0VGE8 651 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 AGERQ15109 404 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 C2orf76Q3KRA6 126 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SLC16A12Q6ZSM3 486 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PIANPQ8IYJ0 282 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 C1orf162Q8NEQ5 155 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR8B3Q8NGG8 313 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR8B2Q96RD0 313 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MARCH5Q9NX47 278 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DSCAMO60469 2012 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ZCWPW2A0A1B0GU75 182 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PAPLNO95428 1278 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 RGNQ15493 299 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 BEX5Q5H9J7 111 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ELOVL1Q9BW60 279 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GABARAPL3Q9BY60 117 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 HSD3B7Q9H2F3 369 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GP6Q9HCN6 339 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SPANXB1Q9NS25 103 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 EHFQ9NZC4 300 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DOK5Q9P104 306 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PSORS1C1Q9UIG5 152 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 B3GALT1Q9Y5Z6 326 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MAP1LC3B2A6NCE7 125 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TRDCB7Z8K6 153 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 hCG_2039718K7EN88 272 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DNASE2O00115 360 aaPredicted RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 AP4M1O00189 453 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SDHDO14521 159 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PTGESO14684 152 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 VENTXO95231 258 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 DNAL4O96015 105 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR4A8P0C604 315 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 RPS4Y1P22090 263 aaKnown RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CASP3P42574 277 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR1E2P47887 323 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SULT1A1P50225 295 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 CLDN17P56750 224 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PRDX1Q06830 199 aaKnown RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SRSF5Q13243 272 aaKnown RBP2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF718Q3SXZ3 478 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 VMA21Q3ZAQ7 101 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 SFT2D3Q587I9 215 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF789Q5FWF6 425 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 C1orf220Q5T0J3 134 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TCF24Q7RTU0 167 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 TAC4Q86UU9 113 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 FAM168AQ92567 244 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 LHX4Q969G2 390 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 PDXPQ96GD0 296 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 MAP1LC3BQ9GZQ8 125 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 OR52D1Q9H346 318 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 GAL3ST2Q9H3Q3 398 aa2.95□□□□□ -1.94
CSMD3-202ENST00000339701 FAM221AA4D161 298 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 KLKB1P03952 638 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CD1DP15813 335 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF16P17020 682 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 GCAP28676 217 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF140P52738 457 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 639.8 ms