RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SPRY3O43610 288 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 ECDO95905 644 aaPredicted RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 MELTFP08582 738 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 GSTP1P09211 210 aaKnown RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 PRKACAP17612 351 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 AGAP20933 346 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 GNG2P59768 71 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 AP3S2P59780 193 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 GMFBP60983 142 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 FGF12P61328 243 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 MZT1Q08AG7 82 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 KLF9Q13886 244 aaPredicted RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 ADIPOQQ15848 244 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 PCGF3Q3KNV8 242 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 ELP2Q6IA86 826 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 C6orf201Q7Z4U5 140 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 Q8NFD4 153 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 NEUROG1Q92886 237 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 UFSP2Q9NUQ7 469 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 A0A1B0GWJ7 208 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 MFNGO00587 321 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 AKR7A2O43488 359 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 OR7C1O76099 320 aaPredicted RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 ZNF81P51508 661 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 ARFRP1Q13795 201 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 MPPED2Q15777 294 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 BEX5Q5H9J7 111 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 SIGIRRQ6IA17 410 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 CCBE1Q6UXH8 406 aaPredicted RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 ZNF826PQ6ZT77 177 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 TRAPPC6BQ86SZ2 158 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 DMRTC2Q8IXT2 367 aaPredicted RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 ENKURQ8TC29 256 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 EMG1Q92979 244 aaKnown RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 NEDD4LQ96PU5 975 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 IL36RNQ9UBH0 155 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 FAM240BA0A1B0GVZ2 78 aa12.46□□□□□ -0.41
CBX3-201ENST00000337620 ANKRD20A5PA0PJZ0 165 aa12.46□□□□□ -0.41
CBX3-201ENST00000337620 BRICD5Q6PL45 260 aa12.46□□□□□ -0.41
CBX3-201ENST00000337620 FAM58AQ8N1B3 248 aa12.46□□□□□ -0.41
CBX3-201ENST00000337620 HCFC1P51610 2035 aa12.46□□□□□ -0.41
CBX3-201ENST00000337620 E7EQL1 145 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 PLAUP00749 431 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 MT-ND4P03905 459 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 DUSP1P28562 367 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 ACTBP60709 375 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 ACTG1P63261 375 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 DYRK1AQ13627 763 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 PNLIPRP3Q17RR3 467 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 ATAD3CQ5T2N8 411 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 OR2V2Q96R30 315 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 FAAP24Q9BTP7 215 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 RNF115Q9Y4L5 304 aa12.46□□□□□ -0.42
CBX3-201ENST00000337620 ANKHD1Q8IWZ3 2542 aaKnown RBP12.46□□□□□ -0.42
CBX3-201ENST00000337620 ROS1P08922 2347 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
CBX3-201ENST00000337620 hCG_1807616A0A1W2PRN6 198 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 SIAH2O43255 324 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 SSX5O60225 188 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 CSF1P09603 554 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 PGA5P0DJD9 388 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 SERPINF1P36955 418 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 KIR2DL3P43628 341 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 ARL6IP1Q15041 203 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 GLCCI1Q86VQ1 547 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 GVQW1Q8N7I0 195 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 PIK3IP1Q96FE7 263 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 IFT46Q9NQC8 304 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 TAS2R8Q9NYW2 309 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 NLKQ9UBE8 527 aa12.45□□□□□ -0.42
CBX3-201ENST00000337620 SERPINE3A8MV23 424 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 NXPH2O95156 264 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 CHATP28329 748 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 CD200P41217 278 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
CBX3-201ENST00000337620 Q8IYB0 196 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 ST8SIA4Q92187 359 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 MMP28Q9H239 520 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 HRASLSQ9HDD0 168 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 MCUBQ9NWR8 336 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 C1orf123Q9NWV4 160 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 HSF4Q9ULV5 492 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 PDCD6O75340 191 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 C1QL1O75973 258 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 IGHV1-46P01743 117 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 FUT3P21217 361 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 IKZF1Q13422 519 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 DAZAP2Q15038 168 aaPredicted RBP12.44□□□□□ -0.42
CBX3-201ENST00000337620 SPRNQ5BIV9 151 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 NHLRC3Q5JS37 347 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 WDR82Q6UXN9 313 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 MEGF10Q96KG7 1140 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 NRIP2Q9BQI9 281 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 C7orf50Q9BRJ6 194 aaKnown RBP12.44□□□□□ -0.42
CBX3-201ENST00000337620 TLNRD1Q9H1K6 362 aa12.44□□□□□ -0.42
CBX3-201ENST00000337620 RHOFQ9HBH0 211 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms