RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PRH1P02810 166 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 SRFP11831 508 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 SRSF4Q08170 494 aaKnown RBP14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 C20orf196Q8IYI0 205 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 OR14K1Q8NGZ2 314 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 CCDC74BQ96LY2 380 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 BCO1Q9HAY6 547 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 AMDHD2Q9Y303 409 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 FER1L5A0AVI2 2057 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 CNOT4O95628 575 aaKnown RBP14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 APLNRP35414 380 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 CDX1P47902 265 aaPredicted RBP14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 RRADP55042 308 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 GRB2P62993 217 aaKnown RBP14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 TRA2AQ13595 282 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 ZNF239Q16600 458 aaKnown RBP14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 VAX1Q5SQQ9 334 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 OR2AE1Q8NHA4 323 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 RTBDNQ9BSG5 229 aaPredicted RBP14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 SPACA1Q9HBV2 294 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 KCNIP3Q9Y2W7 256 aa14.48□□□□□ -0.09
CDC42EP4-201ENST00000335793 HGFACQ04756 655 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 TMEM156Q8N614 296 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 SLC30A7Q8NEW0 376 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 GJC3Q8NFK1 279 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 OR6X1Q8NH79 312 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 MMP26Q9NRE1 261 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 AHCTF1Q8WYP5 2266 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 TP53I11O14683 189 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 RPL12P30050 165 aaKnown RBP14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 PNLIPRP3Q17RR3 467 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 GUSBP11Q6P575 273 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 SLC25A43Q8WUT9 341 aaPredicted RBP14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 C1orf123Q9NWV4 160 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 LPAR3Q9UBY5 353 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 B3GALT1Q9Y5Z6 326 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 E9PLN8 166 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 SPRY1O43609 319 aaPredicted RBP14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 HPNP05981 417 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 CD37P11049 281 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 HOXA5P20719 270 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 MSR1P21757 451 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 PAX6P26367 422 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 SUPT4H1P63272 117 aaKnown RBP14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 NHLH2Q02577 135 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 PDCD1Q15116 288 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 KHDC3LQ587J8 217 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 NFAM1Q8NET5 270 aaPredicted RBP14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 EMG1Q92979 244 aaKnown RBP14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 RASL10BQ96S79 203 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 PECRQ9BY49 303 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 PARPBPQ9NWS1 579 aa14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 C19orf25Q9UFG5 118 aaPredicted RBP14.47□□□□□ -0.09
CDC42EP4-201ENST00000335793 MFNGO00587 321 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 CELA2AP08217 269 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 HOXA6P31267 233 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 FCGR2CP31995 323 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 UBE2V2Q15819 145 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 AKR1C8PQ5T2L2 129 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 RABEPKQ7Z6M1 372 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 CADM4Q8NFZ8 388 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 FAAP24Q9BTP7 215 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 ULBP2Q9BZM5 246 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 EIF5A2Q9GZV4 153 aaKnown RBP14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 SLC26A1Q9H2B4 701 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 MRPS17Q9Y2R5 130 aaKnown RBP14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 PUS1Q9Y606 427 aaKnown RBP eCLIP14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 ZNF727A8MUV8 499 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 M0R135 149 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 LCATP04180 440 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 SOD3P08294 240 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 MMP7P09237 267 aaPredicted RBP14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 PNLIPP16233 465 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 ZNF17P17021 662 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 SLC35A1P78382 337 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 BATFQ16520 125 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 PHLDA2Q53GA4 152 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 C10orf91Q5T1B1 145 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 SLC25A47Q6Q0C1 308 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 SPACA9Q96E40 222 aaPredicted RBP14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 ZNF799Q96GE5 643 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 KIRREL1Q96J84 757 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 ZNF385AQ96PM9 386 aaKnown RBP14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 UCN2Q96RP3 112 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 FSCN3Q9NQT6 498 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 CYTL1Q9NRR1 136 aa14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 NXT1Q9UKK6 140 aaKnown RBP14.46□□□□□ -0.09
CDC42EP4-201ENST00000335793 DIRAS3O95661 229 aa14.46□□□□□ -0.1
CDC42EP4-201ENST00000335793 Q6ZRG5 221 aa14.46□□□□□ -0.1
CDC42EP4-201ENST00000335793 OR2M3Q8NG83 312 aa14.46□□□□□ -0.1
CDC42EP4-201ENST00000335793 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.46□□□□□ -0.1
CDC42EP4-201ENST00000335793 TP53TG5Q9Y2B4 290 aa14.46□□□□□ -0.1
CDC42EP4-201ENST00000335793 NPIPB13A6NJU9 1138 aa14.45□□□□□ -0.1
CDC42EP4-201ENST00000335793 NPIPB4C9JG80 1138 aa14.45□□□□□ -0.1
CDC42EP4-201ENST00000335793 PPP1R2P9O14990 202 aa14.45□□□□□ -0.1
CDC42EP4-201ENST00000335793 GDF9O60383 454 aa14.45□□□□□ -0.1
CDC42EP4-201ENST00000335793 OR13C7P0DN81 318 aa14.45□□□□□ -0.1
CDC42EP4-201ENST00000335793 MPZP25189 248 aa14.45□□□□□ -0.1
CDC42EP4-201ENST00000335793 SULT1A1P50225 295 aa14.45□□□□□ -0.1
CDC42EP4-201ENST00000335793 THNSL2Q86YJ6 484 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms