RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 KIR2DL1P43626 348 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 KIR2DL2P43627 348 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 ACSM6Q6P461 480 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 SLCO4C1Q6ZQN7 724 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OR2I1PQ8NGU4 316 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 RPS4Y2Q8TD47 263 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OIT3Q8WWZ8 545 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 RDH5Q92781 318 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 GMPPAQ96IJ6 420 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 CDCA3Q99618 268 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 C20orf141Q9NUB4 165 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 LIPGQ9Y5X9 500 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 ARHGAP21Q5T5U3 1957 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 FUT3P21217 361 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 DCDP81605 110 aaKnown RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 TRILQ7L0X0 811 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 C9orf170A2RU37 121 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 OPRK1P41145 380 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 CCR2P41597 374 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 P2RY1P47900 373 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 PLPPR5Q32ZL2 321 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 Q96M85 177 aa5.56□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF107Q9UII5 783 aaPredicted RBP5.56□□□□□ -1.52
CSMD1-201ENST00000335551 MALRD1Q5VYJ5 2156 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 MFSD2BA6NFX1 497 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 RECKO95980 971 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 CYBAP13498 195 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 GAB4Q2WGN9 574 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SAMD13Q5VXD3 122 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 MRGPRGQ86SM5 289 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 APOOQ9BUR5 198 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 ICAM5Q9UMF0 924 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 OR2W1Q9Y3N9 320 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 DHRS7CA6NNS2 312 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SLC17A2O00624 439 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 LYZL6O75951 148 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 LIPFP07098 398 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 WDR34Q96EX3 536 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TOE1Q96GM8 510 aaKnown RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PARP11Q9NR21 331 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TBX21Q9UL17 535 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF236Q9UL36 1845 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 DLEC1Q9Y238 1755 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 WNK3Q9BYP7 1800 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 H3BQ15 152 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 HMGN4O00479 90 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 DRD1P21728 446 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 IER3P46695 156 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 YBX1P67809 324 aaKnown RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 BTG2P78543 158 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 HES3Q5TGS1 186 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SLC25A34Q6PIV7 304 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 RTL10Q7L3V2 364 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PIK3IP1Q96FE7 263 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 CACNG5Q9UF02 275 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PIAS3Q9Y6X2 628 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 RBBP6Q7Z6E9 1792 aaKnown RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 C7orf77A4D0Y5 90 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 RBP4P02753 201 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SHBQ15464 509 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SIRT6Q8N6T7 355 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 DOK1Q99704 481 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 DUSP13Q9UII6 198 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PKD1L3Q7Z443 1732 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 MYO18BQ8IUG5 2567 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TNRC6AQ8NDV7 1962 aaKnown RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 GREB1Q4ZG55 1949 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 KLRC4-KLRK1H3BQV0 150 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 RER1O15258 196 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF816Q0VGE8 651 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 LGALSLQ3ZCW2 172 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 ADAMTSL4Q6UY14 1074 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 NUFIP2Q7Z417 695 aaKnown RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM178AQ8NBL3 297 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 HIST1H4GQ99525 98 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 LANCL2Q9NS86 450 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 M0R082 166 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 CAMKMTQ7Z624 323 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TAAR2Q9P1P5 351 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 ZBTB42B2RXF5 422 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SLCO2B1O94956 709 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 COMPP49747 757 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TAS1R1Q7RTX1 841 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SLC35E3Q7Z769 313 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 WDFY1Q8IWB7 410 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TCEAL8Q8IYN2 117 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SPPL3Q8TCT6 385 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TM4SF18Q96CE8 201 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM272A0A1B0GTI8 110 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 A0A1W2PPC4 97 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM210A6NLX4 147 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 HEPACAM2A8MVW5 462 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PPP6CO00743 305 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 LANCL1O43813 399 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PSMB5P28074 263 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 C1orf61Q13536 156 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 JMJD6Q6NYC1 403 aaPredicted RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PAQR6Q6TCH4 344 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 LIAT1Q6ZQX7 453 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 ROBO4Q8WZ75 1007 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms