RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RYDENQ9NUL5 291 aaKnown RBP15.34■□□□□ 0.05
LRCH3-201ENST00000334859 DNAJB11Q9UBS4 358 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 IFNA21P01568 189 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 ZNF728P0DKX0 622 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 IL15RAQ13261 267 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 OR8B8Q15620 311 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 UQCC3Q6UW78 93 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 ASCL4Q6XD76 172 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 ARL11Q969Q4 196 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 ZPBPQ9BS86 351 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 SLC5A7Q9GZV3 580 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 C12orf4Q9NQ89 552 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 MRPS18CQ9Y3D5 142 aaKnown RBP15.34■□□□□ 0.05
LRCH3-201ENST00000334859 GPR179Q6PRD1 2367 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 TECTAO75443 2155 aa15.34■□□□□ 0.05
LRCH3-201ENST00000334859 RAB19A4D1S5 217 aa15.33■□□□□ 0.05
LRCH3-201ENST00000334859 ZNF705EA8MWA4 302 aaPredicted RBP15.33■□□□□ 0.05
LRCH3-201ENST00000334859 ZNF587BE7ETH6 402 aa15.33■□□□□ 0.05
LRCH3-201ENST00000334859 TERTO14746 1132 aaKnown RBP15.33■□□□□ 0.05
LRCH3-201ENST00000334859 XRCC2O43543 280 aa15.33■□□□□ 0.05
LRCH3-201ENST00000334859 CELA3AP09093 270 aa15.33■□□□□ 0.05
LRCH3-201ENST00000334859 MMP7P09237 267 aaPredicted RBP15.33■□□□□ 0.05
LRCH3-201ENST00000334859 CCNOP22674 350 aa15.33■□□□□ 0.05
LRCH3-201ENST00000334859 CPEB3Q8NE35 698 aaKnown RBP15.33■□□□□ 0.05
LRCH3-201ENST00000334859 MRPL24Q96A35 216 aaKnown RBP15.33■□□□□ 0.05
LRCH3-201ENST00000334859 MARS2Q96GW9 593 aaKnown RBP15.33■□□□□ 0.05
LRCH3-201ENST00000334859 CELSR3Q9NYQ7 3312 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 A0A096LPE4 126 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 A0A1W2PPZ6 126 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 SCGB1D2O95969 90 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 MPLP40238 635 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 SMCO1Q147U7 214 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 ABHD17BQ5VST6 288 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 OR2M7Q8NG81 312 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 SIGLEC12Q96PQ1 595 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 HES7Q9BYE0 225 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF703Q9H7S9 590 aaPredicted RBP15.33■□□□□ 0.04
LRCH3-201ENST00000334859 TMEM100Q9NV29 134 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 PARPBPQ9NWS1 579 aa15.33■□□□□ 0.04
LRCH3-201ENST00000334859 ZNHIT1O43257 154 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF708P17019 499 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 MALLQ13021 153 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 SP6Q3SY56 376 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 PHLDA2Q53GA4 152 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 GGNBP1Q5YKI7 109 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 DEFB123Q8N688 67 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF611Q8N823 705 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 TMEM45BQ96B21 275 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 CNTNAP3BQ96NU0 1288 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 FAM173AQ9BQD7 235 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 CNTNAP3Q9BZ76 1288 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 ARRDC1-AS1Q9H2J1 176 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 SLC7A10Q9NS82 523 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 DECR2Q9NUI1 292 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 FOXJ2Q9P0K8 574 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 B4GALT7Q9UBV7 327 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 FAM166BA8MTA8 275 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 C9orf172C9J069 976 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 PDCD6O75340 191 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 NEURL1O76050 574 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 OR7C1O76099 320 aaPredicted RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 ACTL6AO96019 429 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 FCGR2CP31995 323 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 RBM11P57052 281 aaKnown RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 ARF1P84077 181 aaKnown RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 RPL7L1Q6DKI1 246 aaKnown RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 SLC25A26Q70HW3 274 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 CALHM1Q8IU99 346 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 TSNAXQ99598 290 aaKnown RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 PAPOLGQ9BWT3 736 aaKnown RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 NKX6-2Q9C056 277 aaPredicted RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF442Q9H7R0 627 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF286AQ9HBT8 521 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 IL36GQ9NZH8 169 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 KCNIP3Q9Y2W7 256 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 LSM5Q9Y4Y9 91 aaKnown RBP15.32■□□□□ 0.04
LRCH3-201ENST00000334859 FREM1Q5H8C1 2179 aa15.32■□□□□ 0.04
LRCH3-201ENST00000334859 K7EPK0 472 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 OR5AC1P0C628 307 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 STK11Q15831 433 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 OR2A2Q6IF42 318 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 FAM71E2Q8N5Q1 922 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 RTN4IP1Q8WWV3 396 aaPredicted RBP15.31■□□□□ 0.04
LRCH3-201ENST00000334859 C1QTNF5Q9BXJ0 243 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 NAA60Q9H7X0 242 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 CALHM2Q9HA72 323 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 LPAR3Q9UBY5 353 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 HKR1P10072 659 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 CD79AP11912 226 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 CCL2P13500 99 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 RCC1P18754 421 aaPredicted RBP15.31■□□□□ 0.04
LRCH3-201ENST00000334859 LHX2P50458 406 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 CDCP2Q5VXM1 449 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 DHRS11Q6UWP2 260 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 OR5L1Q8NGL2 311 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 TECTBQ96PL2 329 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 DDA1Q9BW61 102 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 PRDM14Q9GZV8 571 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 TAF9BQ9HBM6 251 aa15.31■□□□□ 0.04
LRCH3-201ENST00000334859 PCDHB16Q9NRJ7 776 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms