RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 IGKV1-12A0A0C4DH73 117 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 ZIC3O60481 467 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 ONECUT2O95948 504 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 IGKV1D-12P01611 117 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 CTSDP07339 412 aaPredicted RBP10.71□□□□□ -0.7
VPS33B-201ENST00000333371 EIF1P41567 113 aaKnown RBP10.71□□□□□ -0.7
VPS33B-201ENST00000333371 FAM189A2Q15884 450 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 LPAL2Q16609 132 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 MIDNQ504T8 468 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 C10orf128Q5T292 105 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 Q6ZPA2 131 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 IP6K3Q96PC2 410 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 GPHA2Q96T91 129 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 ZDHHC8Q9ULC8 765 aa10.71□□□□□ -0.7
VPS33B-201ENST00000333371 CCDC187A0A096LP49 1063 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 C9J4A7 227 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 OTX1P32242 354 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 SNRPEP62304 92 aaKnown RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 NHLH2Q02577 135 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 SMCO1Q147U7 214 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 SURF2Q15527 256 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 SWI5Q1ZZU3 235 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 MRPL14Q6P1L8 145 aaKnown RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 TMEM156Q8N614 296 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 RTN4IP1Q8WWV3 396 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 ALKBH3Q96Q83 286 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 NAA11Q9BSU3 229 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 RPS10P5Q9NQ39 176 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 BIN3Q9NQY0 253 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 TUBD1Q9UJT1 453 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 LINC01387J3KSC0 135 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 TP53I11O14683 189 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 TAAR5O14804 337 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 IFNA21P01568 189 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 LCATP04180 440 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 SNRNP70P08621 437 aaKnown RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 B4GALT1P15291 398 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 HABP2Q14520 560 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 ZNF239Q16600 458 aaKnown RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 PEAR1Q5VY43 1037 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 SLC22A25Q6T423 547 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 MAML2Q8IZL2 1156 aaPredicted RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 OR10AD1Q8NGE0 317 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 PARP11Q9NR21 331 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 CACFD1Q9UGQ2 172 aa10.7□□□□□ -0.7
VPS33B-201ENST00000333371 RCL1Q9Y2P8 373 aaKnown RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 PTRH2Q9Y3E5 179 aaKnown RBP10.7□□□□□ -0.7
VPS33B-201ENST00000333371 DNAJC13O75165 2243 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 A0A0G2JMM0 328 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 LOC102725191A0A1B0GVB3 256 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 A0A1W2PPB8 328 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 A0A1W2PRS3 328 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 KIR3DP1A8MWS1 328 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 ZNF728P0DKX0 622 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 CCL4P13236 92 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 TRA2AQ13595 282 aaKnown RBP eCLIP10.69□□□□□ -0.7
VPS33B-201ENST00000333371 TMEM187Q14656 261 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 EIF5AL1Q6IS14 154 aaKnown RBP10.69□□□□□ -0.7
VPS33B-201ENST00000333371 HSD17B11Q8NBQ5 300 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 FGFBP3Q8TAT2 258 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 SFT2D1Q8WV19 159 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 USB1Q9BQ65 265 aaKnown RBP10.69□□□□□ -0.7
VPS33B-201ENST00000333371 WDR54Q9H977 334 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 CRLF2Q9HC73 371 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 FOXD3Q9UJU5 478 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-201ENST00000333371 DOCK10Q96BY6 2186 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 SLC33A1O00400 549 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-201ENST00000333371 SGCEO43556 437 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 JTBO76095 146 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 DVL1P1P54792 670 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-201ENST00000333371 HIST1H3AP68431 136 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 ABCA11PQ4W5N1 156 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 HIST2H3PS2Q5TEC6 136 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 PLXDC2Q6UX71 529 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 HIST2H3AQ71DI3 136 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 YRDCQ86U90 279 aaKnown RBP10.69□□□□□ -0.7
VPS33B-201ENST00000333371 FBXL14Q8N1E6 418 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 METTL9Q9H1A3 318 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 DKKL1Q9UK85 242 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 AHCTF1Q8WYP5 2266 aa10.69□□□□□ -0.7
VPS33B-201ENST00000333371 A0A1W2PPE3 182 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 EIF3GO75821 320 aaKnown RBP eCLIP10.68□□□□□ -0.7
VPS33B-201ENST00000333371 TSPAN15O95858 294 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 GLAP06280 429 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 UMODP07911 640 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 CYC1P08574 325 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 LIFP15018 202 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 SPINK2P20155 84 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 EIF5AP63241 154 aaKnown RBP10.68□□□□□ -0.7
VPS33B-201ENST00000333371 RBMS3Q6XE24 437 aaKnown RBP10.68□□□□□ -0.7
VPS33B-201ENST00000333371 MEX3BQ6ZN04 569 aaKnown RBP10.68□□□□□ -0.7
VPS33B-201ENST00000333371 SPTSSAQ969W0 71 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 SMOC1Q9H4F8 434 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 NAA60Q9H7X0 242 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 SLC2A9Q9NRM0 540 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 TECTAO75443 2155 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 NTN3O00634 580 aaPredicted RBP10.68□□□□□ -0.7
VPS33B-201ENST00000333371 RRP8O43159 456 aaKnown RBP10.68□□□□□ -0.7
VPS33B-201ENST00000333371 HEXAP06865 529 aa10.68□□□□□ -0.7
VPS33B-201ENST00000333371 ZNF32P17041 273 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms