RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ZNF774Q6NX45 483 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 POMT1Q9Y6A1 747 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 ARID1AO14497 2285 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 CBR3O75828 277 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 ZNF205O95201 554 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 LCATP04180 440 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 CCL4P13236 92 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 CHATP28329 748 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 AKR1D1P51857 326 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 DVL1P1P54792 670 aaPredicted RBP13.35□□□□□ -0.27
BRCC3-201ENST00000330045 TMEM187Q14656 261 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 GPR137CQ8N3F9 429 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 UBAC2Q8NBM4 344 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 M1APQ8TC57 530 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 RTN4IP1Q8WWV3 396 aaPredicted RBP13.35□□□□□ -0.27
BRCC3-201ENST00000330045 MR1Q95460 341 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 BORCS8Q96FH0 119 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 NAA60Q9H7X0 242 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 SH2D2AQ9NP31 389 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 KIAA1549Q9HCM3 1950 aa13.35□□□□□ -0.27
BRCC3-201ENST00000330045 PCP4L1A6NKN8 68 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 MBPP02686 304 aaPredicted RBP13.34□□□□□ -0.27
BRCC3-201ENST00000330045 OR5AC1P0C628 307 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 PRSS12P56730 875 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 SLC23A3Q6PIS1 610 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 LHFPL2Q6ZUX7 228 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 OR1F12Q8NHA8 337 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 RXFP4Q8TDU9 374 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 NAT6Q93015 286 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 ERGIC1Q969X5 290 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 GALNT14Q96FL9 552 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 KIRREL1Q96J84 757 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 SF3B5Q9BWJ5 86 aaKnown RBP13.34□□□□□ -0.27
BRCC3-201ENST00000330045 CRLF2Q9HC73 371 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 HS3ST3B1Q9Y662 390 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 CACNA1HO95180 2353 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 GJE1A6NN92 205 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 C9JQL5 133 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 E5RGE8 158 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 CRYBA1P05813 215 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 CST2P09228 141 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 OR8U9P0C7N5 309 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 RPL35P42766 123 aaKnown RBP13.34□□□□□ -0.27
BRCC3-201ENST00000330045 FXYD4P59646 89 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 PEA15Q15121 130 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 AVPI1Q5T686 147 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 BRICD5Q6PL45 260 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 ASCL4Q6XD76 172 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
BRCC3-201ENST00000330045 OR8U1Q8NH10 309 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 GLYATL2Q8WU03 294 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 R4GN57 208 aa13.34□□□□□ -0.27
BRCC3-201ENST00000330045 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 GEMIN2O14893 280 aaKnown RBP13.33□□□□□ -0.28
BRCC3-201ENST00000330045 KLF7O75840 302 aaPredicted RBP13.33□□□□□ -0.28
BRCC3-201ENST00000330045 NRASP01111 189 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 RAC3P60763 192 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 CLEC9AQ6UXN8 241 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 OR10AD1Q8NGE0 317 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 LYPD6BQ8NI32 183 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 DYRK2Q92630 601 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 MARS2Q96GW9 593 aaKnown RBP13.33□□□□□ -0.28
BRCC3-201ENST00000330045 BIN3Q9NQY0 253 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 FAM212BQ9NTI7 297 aaPredicted RBP13.33□□□□□ -0.28
BRCC3-201ENST00000330045 MEX3AA1L020 520 aaKnown RBP13.33□□□□□ -0.28
BRCC3-201ENST00000330045 FAM157AC9JC47 383 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.28
BRCC3-201ENST00000330045 NTF4P34130 210 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 PIGYQ3MUY2 71 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 SHEQ5VZ18 495 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 LYZL2Q7Z4W2 148 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 NAXEQ8NCW5 288 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 AKR7LQ8NHP1 331 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 SUCNR1Q9BXA5 334 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 BCO1Q9HAY6 547 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 TMEM38BQ9NVV0 291 aa13.33□□□□□ -0.28
BRCC3-201ENST00000330045 IGKV1-12A0A0C4DH73 117 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 FAM221AA4D161 298 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 CER1O95813 267 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 IGKV1D-12P01611 117 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 PATE4P0C8F1 98 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 SPP1P10451 314 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 ZNF32P17041 273 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 MPLP40238 635 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 PHLDA2Q53GA4 152 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 TSPO2Q5TGU0 170 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 SLC22A25Q6T423 547 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 SKA3Q8IX90 412 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 AKR1E2Q96JD6 320 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 PARP12Q9H0J9 701 aaKnown RBP13.32□□□□□ -0.28
BRCC3-201ENST00000330045 SLC2A9Q9NRM0 540 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 DMXL1Q9Y485 3027 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 C9J4A7 227 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 DNPH1O43598 174 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 DIRAS3O95661 229 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 HTR5AP47898 357 aa13.32□□□□□ -0.28
BRCC3-201ENST00000330045 ZNF468Q5VIY5 522 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-201ENST00000330045 TMEM42Q69YG0 159 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms