RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 RAB3CQ96E17 227 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 CPNE2Q96FN4 548 aaPredicted RBP17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 TECTBQ96PL2 329 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 SLC6A7Q99884 636 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 MFFQ9GZY8 342 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZNF629Q9UEG4 869 aaPredicted RBP17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 KCNK7Q9Y2U2 307 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 PIEZO2Q9H5I5 2752 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 CD300LBA8K4G0 201 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 CD8AP01732 235 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 IL32P24001 234 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 UCNP55089 124 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 SRSF4Q08170 494 aaKnown RBP17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 FAM189A2Q15884 450 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 OR56B1Q8NGI3 324 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 OR5L1Q8NGL2 311 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 NUDCD2Q8WVJ2 157 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 SLC2A8Q9NY64 477 aa17.43■□□□□ 0.38
RIPPLY3-201ENST00000329553 DSPP15924 2871 aaKnown RBP17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 CBR1P16152 277 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 MPZP25189 248 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 PRDX4Q13162 271 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 DHRS2Q13268 280 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 ASCL4Q6XD76 172 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 BEND4Q6ZU67 534 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 GALNT11Q8NCW6 608 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 CSNK2A3Q8NEV1 391 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 METTL9Q9H1A3 318 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 OPA3Q9H6K4 179 aa17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 MAP1BP46821 2468 aaKnown RBP17.42■□□□□ 0.38
RIPPLY3-201ENST00000329553 CST4P01036 141 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 HIST1H1DP16402 221 aaKnown RBP17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 HOXC12P31275 282 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 MEF2DQ14814 521 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 P2RY6Q15077 328 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 SMUG1Q53HV7 270 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 SPATA46Q5T0L3 261 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 TRAPPC6BQ86SZ2 158 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 STEAP2Q8NFT2 490 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 OR5M8Q8NGP6 311 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 ARHGAP5-AS1Q96IT6 56 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 LINC00052Q96N35 136 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 TM2D1Q9BX74 207 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 FGF23Q9GZV9 251 aaPredicted RBP17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 CDH20Q9HBT6 801 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 PRR14LQ5THK1 2151 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 IGKV1-12A0A0C4DH73 117 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 A8MXK9 166 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 HTR3BO95264 441 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 IGKV1D-12P01611 117 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 PDZK1IP1Q13113 114 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 MRPL49Q13405 166 aaKnown RBP17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 SLC51BQ86UW2 128 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 BHLHE23Q8NDY6 225 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 OR4S1Q8NGB4 309 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 DMRTA2Q96SC8 542 aa17.41■□□□□ 0.38
RIPPLY3-201ENST00000329553 POM121CA8CG34 1229 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 FOXI3A8MTJ6 420 aaPredicted RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 DISC1C4P0D8 188 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 SSX5O60225 188 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 LILRA1O75019 489 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 IGKV3-15P01624 115 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 CEACAM8P31997 349 aaPredicted RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 RSU1Q15404 277 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 EIF2S3LQ2VIR3 472 aaKnown RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 LPCAT3Q6P1A2 487 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 CALHM1Q8IU99 346 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 GVQW1Q8N7I0 195 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 HPSE2Q8WWQ2 592 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 SNRNP40Q96DI7 357 aaKnown RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZNF230Q9UIE0 474 aaPredicted RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 SESN1Q9Y6P5 492 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZGRF1Q86YA3 2104 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 SMPD2O60906 423 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 HOXD4P09016 255 aaPredicted RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 GSTP1P09211 210 aaKnown RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 SCGB2B2Q4G0G5 96 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 ZNF474Q6S9Z5 364 aaPredicted RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 BHLHA15Q7RTS1 189 aaPredicted RBP17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 OVCH2Q7RTZ1 564 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 DOLPP1Q86YN1 238 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 OR1S1Q8NH92 325 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 PRRT1Q99946 306 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 PFDN2Q9UHV9 154 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 VSIG4Q9Y279 399 aa17.4■□□□□ 0.38
RIPPLY3-201ENST00000329553 MFNGO00587 321 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 CSTBP04080 98 aaKnown RBP17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 GLI4P10075 376 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 BLVRBP30043 206 aaPredicted RBP17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 FGL1Q08830 312 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZMYND11Q15326 602 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 CEACAM21Q3KPI0 293 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 PRR30Q53SZ7 412 aaPredicted RBP17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 OR2T2Q6IF00 324 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 ZDHHC23Q8IYP9 409 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 PPA2Q9H2U2 334 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 PQLC2LA1A4F0 135 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 FGF2P09038 288 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 CPT2P23786 658 aa17.39■□□□□ 0.37
RIPPLY3-201ENST00000329553 CD34P28906 385 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms