RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 RSU1Q15404 277 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 AKR7LQ8NHP1 331 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 ALKBH3Q96Q83 286 aaPredicted RBP15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 TM2D1Q9BX74 207 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 CRYM-AS1A6NIL9 109 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 CD5P06127 495 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 PTAFRP25105 342 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 H3F3AP84243 136 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 SWI5Q1ZZU3 235 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 SLC16A14Q7RTX9 510 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 OR9K2Q8NGE7 335 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 OR52M1Q8NGK5 317 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 IP6K3Q96PC2 410 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 RPS10P5Q9NQ39 176 aa15.12■□□□□ 0.01
PTP4A3-201ENST00000329397 COLCA2A8K830 154 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 FAM157AC9JC47 383 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 EIF1BO60739 113 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 SNRNP70P08621 437 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 EIF1P41567 113 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 SNRPEP62304 92 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 LSM6P62312 80 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 PPP1R3BQ86XI6 285 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 HSD17B11Q8NBQ5 300 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 SLC25A43Q8WUT9 341 aaPredicted RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 SRXN1Q9BYN0 137 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 RCL1Q9Y2P8 373 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 AHCTF1Q8WYP5 2266 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 ARGFXA6NJG6 315 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 IFNA21P01568 189 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 B4GALT1P15291 398 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 SPINK2P20155 84 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 PP6455Q8WZ26 134 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 NAA11Q9BSU3 229 aaPredicted RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 BIN3Q9NQY0 253 aa15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 PRRC2CQ9Y520 2896 aaKnown RBP15.11■□□□□ 0.01
PTP4A3-201ENST00000329397 NCKAP5O14513 1909 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 A0A0U1RQV5 110 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 SGCEO43556 437 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 NHLH2Q02577 135 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 ZNF468Q5VIY5 522 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 TMEM123Q8N131 208 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 TMEM156Q8N614 296 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 CA5BP1Q8WTZ4 195 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 RTN4IP1Q8WWV3 396 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 CCDC187A0A096LP49 1063 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 IGKV1-12A0A0C4DH73 117 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 LY6G6EA0A0G2JKS1 128 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 A0A0J9YW62 118 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 IGKV1D-12P01611 117 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 LCATP04180 440 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 CTSDP07339 412 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 ALDH3B1P43353 468 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 ZNF84P51523 738 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 HABP2Q14520 560 aaPredicted RBP15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 FAM189A2Q15884 450 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 ABCA11PQ4W5N1 156 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 EIF5AL1Q6IS14 154 aaKnown RBP15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 SLC22A25Q6T423 547 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 MEX3BQ6ZN04 569 aaKnown RBP15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 ZIC4Q8N9L1 334 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 SFT2D1Q8WV19 159 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 GHRLQ9UBU3 117 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 WNT16Q9UBV4 365 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 U3KQA8 63 aa15.1■□□□□ 0.01
PTP4A3-201ENST00000329397 NUDT19A8MXV4 375 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 COX5BP10606 129 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 CTSSP25774 331 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 PCOLCEQ15113 449 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 RBMS3Q6XE24 437 aaKnown RBP15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 GTF3AQ92664 365 aaKnown RBP15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 PHF7Q9BWX1 381 aaPredicted RBP15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 CACFD1Q9UGQ2 172 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 ZDHHC8Q9ULC8 765 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 KIAA1549Q9HCM3 1950 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 A0A1B0GV90 55 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 TAAR5O14804 337 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 ZIC3O60481 467 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 TSPAN15O95858 294 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 ZNF728P0DKX0 622 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 G0S2P27469 103 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 Q6ZPA2 131 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 FBXL14Q8N1E6 418 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 SUMF1Q8NBK3 374 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 PROK2Q9HC23 129 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 DKKL1Q9UK85 242 aa15.09■□□□□ 0.01
PTP4A3-201ENST00000329397 CCDC163A0A0D9SF12 145 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 A0A0G2JMM0 328 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 A0A1W2PPB8 328 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 A0A1W2PPE3 182 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 A0A1W2PRS3 328 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 KIR3DP1A8MWS1 328 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 EIF3GO75821 320 aaKnown RBP eCLIP15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 JTBO76095 146 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 OTX1P32242 354 aaPredicted RBP15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 SURF2Q15527 256 aaPredicted RBP15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 PLXDC2Q6UX71 529 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 YRDCQ86U90 279 aaKnown RBP15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 OR10AD1Q8NGE0 317 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 DNASE2BQ8WZ79 361 aa15.08■□□□□ 0.01
PTP4A3-201ENST00000329397 TMEM54Q969K7 222 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms