RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 ASCL4Q6XD76 172 aa11.79□□□□□ -0.52
CMTM1-201ENST00000328020 CROCCP3Q8IVE0 287 aa11.79□□□□□ -0.52
CMTM1-201ENST00000328020 CLDND2Q8NHS1 167 aa11.79□□□□□ -0.52
CMTM1-201ENST00000328020 MRPS24Q96EL2 167 aaKnown RBP11.79□□□□□ -0.52
CMTM1-201ENST00000328020 ZNF488Q96MN9 340 aa11.79□□□□□ -0.52
CMTM1-201ENST00000328020 PATZ1Q9HBE1 687 aaKnown RBP11.79□□□□□ -0.52
CMTM1-201ENST00000328020 HMG20AQ9NP66 347 aa11.79□□□□□ -0.52
CMTM1-201ENST00000328020 AK6Q9Y3D8 172 aaKnown RBP11.79□□□□□ -0.52
CMTM1-201ENST00000328020 VPS13CQ709C8 3753 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-201ENST00000328020 SLC17A2O00624 439 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 SH2D1BO14796 132 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 TMPRSS2O15393 492 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 ADAM20O43506 726 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 TMEM127O75204 238 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 HTR3BO95264 441 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 IGHV2-5P01817 119 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 GYPAP02724 150 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 GTF2F2P13984 249 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 FOSL1P15407 271 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 GABRA2P47869 451 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 NPBWR2P48146 333 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 FGF12P61328 243 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 IL13RA1P78552 427 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 DGUOKQ16854 277 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 SLC22A6Q4U2R8 563 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 STUMQ69YW2 141 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 ANKRD13BQ86YJ7 626 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 C19orf18Q8NEA5 215 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 C18orf12Q96KH6 178 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 CENPOQ9BU64 300 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 SEBOXQ9HB31 216 aaPredicted RBP11.78□□□□□ -0.52
CMTM1-201ENST00000328020 RBFOX1Q9NWB1 397 aaKnown RBP11.78□□□□□ -0.52
CMTM1-201ENST00000328020 KAAG1Q9UBP8 84 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 TLN2Q9Y4G6 2542 aa11.78□□□□□ -0.52
CMTM1-201ENST00000328020 ABCA1O95477 2261 aa11.77□□□□□ -0.52
CMTM1-201ENST00000328020 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.52
CMTM1-201ENST00000328020 MALRD1Q5VYJ5 2156 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 IGKV1-12A0A0C4DH73 117 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 RFPL4AA6NLU0 287 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 NOTOA8MTQ0 251 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 RFPL4AL1F8VTS6 287 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
CMTM1-201ENST00000328020 SLC22A1O15245 554 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 GPR37O15354 613 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 NDUFB3O43676 98 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 FOXH1O75593 365 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 CDRT1O95170 752 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 BPNT1O95861 308 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 IGKV1D-12P01611 117 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 CHRM2P08172 466 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 CD37P11049 281 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 PSG2P11465 335 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 CD99P14209 185 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 ARSBP15848 533 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 PRDX2P32119 198 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 SDC2P34741 201 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 PITPNBP48739 271 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 LMO4P61968 165 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 ZNF146Q15072 292 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 FAM189A2Q15884 450 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 C11orf91Q3C1V1 193 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 GPR107Q5VW38 600 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 LYPD6Q86Y78 171 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 OSR2Q8N2R0 312 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 ZNF561Q8N587 486 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 OR5T2Q8NGG2 359 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 OR4D6Q8NGJ1 314 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 KCNG3Q8TAE7 436 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 COX4I2Q96KJ9 171 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 BCL7BQ9BQE9 202 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 CLN8Q9UBY8 286 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.53
CMTM1-201ENST00000328020 WNK2Q9Y3S1 2297 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 IFITM5A6NNB3 132 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 B4DSR2 109 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 AIPO00170 330 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 CRTAPO75718 401 aaPredicted RBP11.76□□□□□ -0.53
CMTM1-201ENST00000328020 IL1AP01583 271 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 SFTPBP07988 381 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 WNT2P09544 360 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 SERPINA2P20848 420 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 LSM3P62310 102 aaKnown RBP11.76□□□□□ -0.53
CMTM1-201ENST00000328020 GNB2P62879 340 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
CMTM1-201ENST00000328020 IL13RA2Q14627 380 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 TMEM249Q2WGJ8 235 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 NHLRC3Q5JS37 347 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 CD276Q5ZPR3 534 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 CYB5R2Q6BCY4 276 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 CRIP3Q6Q6R5 217 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 ZNF788Q6ZQV5 615 aa11.76□□□□□ -0.53
CMTM1-201ENST00000328020 RNF144BQ7Z419 303 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms