RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ST8SIA2Q92186 375 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 RBPMSQ93062 196 aaKnown RBP9.22□□□□□ -0.93
CUL4A-201ENST00000326335 TMEM54Q969K7 222 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 CPNE4Q96A23 557 aaPredicted RBP9.22□□□□□ -0.93
CUL4A-201ENST00000326335 LIME1Q9H400 295 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 ZNF703Q9H7S9 590 aaPredicted RBP9.22□□□□□ -0.93
CUL4A-201ENST00000326335 A6NLC8 198 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 HSD17B6O14756 317 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 CNOT4O95628 575 aaKnown RBP9.22□□□□□ -0.93
CUL4A-201ENST00000326335 PRKACAP17612 351 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 NME2P22392 152 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 RPS16P62249 146 aaKnown RBP9.22□□□□□ -0.93
CUL4A-201ENST00000326335 PLP2Q04941 152 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 TUSC1Q2TAM9 212 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 C11orf87Q6NUJ2 197 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 PEG10Q86TG7 708 aaKnown RBP9.22□□□□□ -0.93
CUL4A-201ENST00000326335 SLC38A6Q8IZM9 456 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 OR52H1Q8NGJ2 320 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 HIST1H2AAQ96QV6 131 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 OR2A4O95047 310 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 NMBP08949 121 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 SIGIRRQ6IA17 410 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 OR2A2Q6IF42 318 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 PDZD9Q8IXQ8 264 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 FDCSPQ8NFU4 85 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 OR51H1Q8NH63 302 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 TMEM230Q96A57 120 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 RRNAD1Q96FB5 475 aaKnown RBP9.22□□□□□ -0.93
CUL4A-201ENST00000326335 OR2A7Q96R45 310 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 SLC17A5Q9NRA2 495 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 KIAA1549Q9HCM3 1950 aa9.22□□□□□ -0.93
CUL4A-201ENST00000326335 LOC390937A0A1W2PQ73 354 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 B4E171 279 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 H3BP45 60 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 MFNGO00587 321 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 PHF1O43189 567 aaPredicted RBP9.21□□□□□ -0.93
CUL4A-201ENST00000326335 WT1P19544 449 aaPredicted RBP9.21□□□□□ -0.93
CUL4A-201ENST00000326335 TSPAN7P41732 249 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 FABP6P51161 128 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 PRDX4Q13162 271 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 NSUN5P2Q63ZY6 315 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 SLC25A42Q86VD7 318 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 TPRX1Q8N7U7 411 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 RNASE11Q8TAA1 199 aaKnown RBP9.21□□□□□ -0.93
CUL4A-201ENST00000326335 MRPL24Q96A35 216 aaKnown RBP9.21□□□□□ -0.93
CUL4A-201ENST00000326335 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.21□□□□□ -0.936e-8■■■■■ 67.2
CUL4A-201ENST00000326335 LHX6Q9UPM6 363 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 RFNGQ9Y644 331 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 SIRPB1O00241 398 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 RHBDL1O75783 438 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 C4BPBP20851 252 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 HOXD11P31277 338 aaPredicted RBP9.21□□□□□ -0.93
CUL4A-201ENST00000326335 FAM209AQ5JX71 171 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 PDSS1Q5T2R2 415 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 TMEM88Q6PEY1 159 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 OR6S1Q8NH40 331 aa9.21□□□□□ -0.93
CUL4A-201ENST00000326335 hCG_1807616A0A1W2PRN6 198 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 RFPL4AA6NLU0 287 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 ZNF705EA8MWA4 302 aaPredicted RBP9.21□□□□□ -0.94
CUL4A-201ENST00000326335 RFPL4AL1F8VTS6 287 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 OR5AC1P0C628 307 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 RAB6AP20340 208 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 PSMB6P28072 239 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 THBS4P35443 961 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 LHX2P50458 406 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 AIMP2Q13155 320 aaKnown RBP9.21□□□□□ -0.94
CUL4A-201ENST00000326335 ZNF766Q5HY98 468 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 CLVS2Q5SYC1 327 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 FAM53AQ6NSI3 398 aaPredicted RBP9.21□□□□□ -0.94
CUL4A-201ENST00000326335 LYZL2Q7Z4W2 148 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 OSR2Q8N2R0 312 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 FAM96BQ9Y3D0 163 aa9.21□□□□□ -0.94
CUL4A-201ENST00000326335 H0YIZ8 118 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 HSPA12AO43301 675 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 SP1P08047 785 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 CD46P15529 392 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 PTGER4P35408 488 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 NUP62P37198 522 aaPredicted RBP9.2□□□□□ -0.94
CUL4A-201ENST00000326335 MALLQ13021 153 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 TMEM128Q5BJH2 165 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 TMEM217Q8N7C4 229 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 ZBTB44Q8NCP5 570 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 OR5AP2Q8NGF4 316 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 KCNE4Q8WWG9 221 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 PP6455Q8WZ26 134 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 ZNF175Q9Y473 711 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 CENPEQ02224 2701 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 H3BUI4 141 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 SULT1C2O00338 296 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 HOXA6P31267 233 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 AKR1C3P42330 323 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 HERV-K104P61576 105 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 CLINT1Q14677 625 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 CNN3Q15417 329 aaKnown RBP9.2□□□□□ -0.94
CUL4A-201ENST00000326335 C10orf128Q5T292 105 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 RPUSD3Q6P087 351 aaKnown RBP9.2□□□□□ -0.94
CUL4A-201ENST00000326335 LYPD6Q86Y78 171 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 EMG1Q92979 244 aaKnown RBP9.2□□□□□ -0.94
CUL4A-201ENST00000326335 TREM1Q9NP99 234 aa9.2□□□□□ -0.94
CUL4A-201ENST00000326335 TRGV5A0A0B4J1U4 118 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms