RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SNRNP70P08621 437 aaKnown RBP9.62□□□□□ -0.87
TOP3A-201ENST00000321105 RAB32Q13637 225 aa9.62□□□□□ -0.87
TOP3A-201ENST00000321105 FNDC7Q5VTL7 733 aa9.62□□□□□ -0.87
TOP3A-201ENST00000321105 C17orf82Q86X59 251 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-201ENST00000321105 KCNRGQ8N5I3 272 aa9.62□□□□□ -0.87
TOP3A-201ENST00000321105 SDHAF2Q9NX18 166 aa9.62□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF319Q9P2F9 582 aa9.62□□□□□ -0.87
TOP3A-201ENST00000321105 ERRFI1Q9UJM3 462 aaPredicted RBP9.62□□□□□ -0.87
TOP3A-201ENST00000321105 B4E171 279 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 MKRN2OSH3BPM6 223 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 TSPAN7P41732 249 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 MECP2P51608 486 aaKnown RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 UBE2V2Q15819 145 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 PHYHD1Q5SRE7 291 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 LGI3Q8N145 548 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 RBPMSQ93062 196 aaKnown RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 RTL8AQ9BWD3 113 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 GHITMQ9H3K2 345 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 C9orf170A2RU37 121 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 TOR1AO14656 332 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 PRRG2O14669 202 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 IGF2P01344 180 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 CLPSP04118 112 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 MRPS34P82930 218 aaKnown RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF674Q2M3X9 581 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF626Q68DY1 528 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF573Q86YE8 665 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF485Q8NCK3 441 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 OR6K3Q8NGY3 331 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 GPX8Q8TED1 209 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SPSB1Q96BD6 273 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 IMMP1LQ96LU5 166 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 OR2J1Q9GZK6 312 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 DEPPQ9NTK1 212 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SERPINE3A8MV23 424 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 C9orf172C9J069 976 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 TGM6O95932 706 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 KRASP01116 189 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SNTB1Q13884 538 aaKnown RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 TMEM88Q6PEY1 159 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 RNF144BQ7Z419 303 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 ARHGEF39Q8N4T4 335 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 PXT1Q8NFP0 134 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 FAM206AQ9NX38 181 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 PUS1Q9Y606 427 aaKnown RBP eCLIP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 LRRK1Q38SD2 2015 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 C2orf16Q68DN1 1984 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SULT1C2O00338 296 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 MSTNO14793 375 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 NKX2-1P43699 371 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SRSF6Q13247 344 aaKnown RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SPANXN5Q5MJ07 72 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SLC25A47Q6Q0C1 308 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 CISD2Q8N5K1 135 aaKnown RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 ADAT1Q9BUB4 502 aaKnown RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 PECRQ9BY49 303 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 SAV1Q9H4B6 383 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-201ENST00000321105 B3GAT1Q9P2W7 334 aa9.61□□□□□ -0.87
TOP3A-201ENST00000321105 C5orf63A6NC05 138 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 TMEM200CA6NKL6 621 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF250P15622 560 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 CBR1P16152 277 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 AKR1C3P42330 323 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 FOXG1P55316 489 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ZP4Q12836 540 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF169Q14929 603 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-201ENST00000321105 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 RTL6Q6ICC9 239 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ACOT7LQ6ZUV0 252 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 FDCSPQ8NFU4 85 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 TCTEX1D2Q8WW35 142 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 LPAR5Q9H1C0 372 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 AK3Q9UIJ7 227 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 A0A0U1RQK1 487 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ST8SIA3O43173 380 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ACTL6BO94805 426 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 CALCRP30988 508 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 CD80P33681 288 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 IFITM2Q01629 132 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF239Q16600 458 aaKnown RBP9.6□□□□□ -0.87
TOP3A-201ENST00000321105 SPINK9Q5DT21 86 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 FAM27BQ5VT28 67 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 UNQ9370/PRO34162Q6UXP9 181 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 PPP1R35Q8TAP8 253 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ST8SIA2Q92186 375 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 CNTNAP3BQ96NU0 1288 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 TAF9BQ9HBM6 251 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 OPN4Q9UHM6 478 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 RALYQ9UKM9 306 aaKnown RBP9.6□□□□□ -0.87
TOP3A-201ENST00000321105 VSIG4Q9Y279 399 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 FIGNL2A6NMB9 653 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 CFDP00746 253 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-201ENST00000321105 IFNA4P05014 189 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 S100A9P06702 114 aaKnown RBP9.6□□□□□ -0.87
TOP3A-201ENST00000321105 BCL3P20749 454 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ELLP55199 621 aaPredicted RBP9.6□□□□□ -0.87
TOP3A-201ENST00000321105 GNG3P63215 75 aa9.6□□□□□ -0.87
TOP3A-201ENST00000321105 ZNF816Q0VGE8 651 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms