RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 LINC01387J3KSC0 135 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 PRSS1P07477 247 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 CAPZBP47756 277 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 SSX1Q16384 188 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 PRSS36Q5K4E3 855 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 C17orf99Q6UX52 265 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 MOB3BQ86TA1 216 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 BVESQ8NE79 360 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 OR2A5Q96R48 311 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 TNRC6CQ9HCJ0 1690 aaKnown RBP15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 TCRBV5S1A1TA0A578 114 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 ERVS71-1P61550 626 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 PRSS54Q6PEW0 395 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 SPNS3Q6ZMD2 512 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 TMEM116Q8NCL8 245 aa15.11■□□□□ 0.01
SMCHD1-201ENST00000320876 ZNF236Q9UL36 1845 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 IGHV3-15A0A0B4J1V0 119 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 TNFRSF1AP19438 455 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 IER2Q9BTL4 223 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 TMEM167BQ9NRX6 74 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 WSB2Q9NYS7 404 aaPredicted RBP15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 MFNGO00587 321 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 SOCS7O14512 581 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 SRSF9Q13242 221 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 SP6Q3SY56 376 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 OR13H1Q8NG92 308 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 PLXNA1Q9UIW2 1896 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 LILRB1Q8NHL6 650 aaPredicted RBP15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 TRMT61AQ96FX7 289 aaKnown RBP15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 A0A0A6YYD5 115 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 IGSF23A1L1A6 192 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 SULT1A1P50225 295 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 C12orf73Q69YU5 71 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 MIOXQ9UGB7 285 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 A0A087WUJ7 227 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 KLKB1P03952 638 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 NPY1RP25929 384 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 HTRA3P83110 453 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 BTLAQ7Z6A9 289 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 ELOVL1Q9BW60 279 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 THYN1Q9P016 225 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 F11P03951 625 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 DYNLT3P51808 116 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 AGERQ15109 404 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 GPX7Q96SL4 187 aaPredicted RBP15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 RHNO1Q9BSD3 238 aa15.1■□□□□ 0.01
SMCHD1-201ENST00000320876 ASCL1P50553 236 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 DSCR4P56555 118 aaPredicted RBP15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 GNG3P63215 75 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 RNF165Q6ZSG1 346 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 PITPNC1Q9UKF7 332 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 C21orf62-AS1Q17RA5 79 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 GRAMD2BQ96HH9 432 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 MPDZO75970 2070 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 KISS1RQ969F8 398 aaPredicted RBP15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 FBXL17Q9UF56 701 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 FAM74A7A6NL05 159 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 STARD4Q96DR4 205 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 HES7Q9BYE0 225 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 ABCA3Q99758 1704 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 DOCK7Q96N67 2140 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 CRXO43186 299 aaPredicted RBP15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 CDC14BO60729 498 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 KLF7O75840 302 aaPredicted RBP15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 GCSHP23434 173 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 JMJD6Q6NYC1 403 aaPredicted RBP15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 OR1L6Q8NGR2 347 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 OR1B1Q8NGR6 318 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 SARAFQ96BY9 339 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 TMEM238LA0A1B0GVL6 79 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 A6NJY4 79 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 ACAA1P09110 424 aaPredicted RBP15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 IL24Q13007 206 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 HIST3H3Q16695 136 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 ZNF766Q5HY98 468 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 SRD5A3Q9H8P0 318 aa15.09■□□□□ 0.01
SMCHD1-201ENST00000320876 LANCL1O43813 399 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 RIGQ13278 110 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 KHDC3LQ587J8 217 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 FBXO46Q6PJ61 603 aaPredicted RBP15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 C20orf196Q8IYI0 205 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 DEFB108BQ8NET1 73 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 NHSQ6T4R5 1651 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 DOCK6Q96HP0 2047 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 ABCA1O95477 2261 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 CBR3O75828 277 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 MICBQ29980 383 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 DPPA3Q6W0C5 159 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 SLC36A1Q7Z2H8 476 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 OR2D2Q9H210 308 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 IL36GQ9NZH8 169 aa15.08■□□□□ 0.01
SMCHD1-201ENST00000320876 WFDC8Q8IUA0 241 aa15.08■□□□□ 0
SMCHD1-201ENST00000320876 FCMRO60667 390 aa15.08■□□□□ 0
SMCHD1-201ENST00000320876 ABLIM3O94929 683 aa15.08■□□□□ 0
SMCHD1-201ENST00000320876 OR10G8Q8NGN5 311 aa15.08■□□□□ 0
SMCHD1-201ENST00000320876 PDFQ9HBH1 243 aa15.08■□□□□ 0
SMCHD1-201ENST00000320876 ACAA2P42765 397 aaKnown RBP15.08■□□□□ 0
SMCHD1-201ENST00000320876 MSL2Q9HCI7 577 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms