RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RSU1Q15404 277 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 PCSK4Q6UW60 755 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 CLEC18BQ6UXF7 455 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 OVCH2Q7RTZ1 564 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 GALNT11Q8NCW6 608 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 TMEM230Q96A57 120 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 Q96M66 194 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 FOXB1Q99853 325 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 RGCCQ9H4X1 137 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 C14orf166Q9Y224 244 aaKnown RBP12.29□□□□□ -0.44
VRK3-201ENST00000316763 OR6C6A6NF89 314 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 HTR3BO95264 441 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 ZNF32P17041 273 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 GABRR1P24046 479 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 NTF4P34130 210 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 LY6DQ14210 128 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 SLC9A3R2Q15599 337 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 LHFPL2Q6ZUX7 228 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 BVESQ8NE79 360 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 WDYHV1Q96HA8 205 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 RTBDNQ9BSG5 229 aaPredicted RBP12.29□□□□□ -0.44
VRK3-201ENST00000316763 ZNF701Q9NV72 531 aaPredicted RBP12.29□□□□□ -0.44
VRK3-201ENST00000316763 EDARQ9UNE0 448 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 SPEF1Q9Y4P9 236 aa12.29□□□□□ -0.44
VRK3-201ENST00000316763 FAM230AA0A1W2PPH8 454 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 FIGNL2A6NMB9 653 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 F5H0A9 414 aaPredicted RBP12.28□□□□□ -0.44
VRK3-201ENST00000316763 SDCBPO00560 298 aaPredicted RBP12.28□□□□□ -0.44
VRK3-201ENST00000316763 SCO1O75880 301 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 PGAM2P15259 253 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 B4GALT1P15291 398 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 BEX5Q5H9J7 111 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 OR2AE1Q8NHA4 323 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 ABHD3Q8WU67 409 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 DCUN1D4Q92564 292 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 BORCS8Q96FH0 119 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 LINC00052Q96N35 136 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
VRK3-201ENST00000316763 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 GPR35Q9HC97 309 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 LUZP4Q9P127 313 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 LHX6Q9UPM6 363 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 NBEAQ8NFP9 2946 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 ZNF407Q9C0G0 2248 aa12.28□□□□□ -0.44
VRK3-201ENST00000316763 RTTNQ86VV8 2226 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 FARS2O95363 451 aaKnown RBP12.27□□□□□ -0.44
VRK3-201ENST00000316763 NRASP01111 189 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 ACKR3P25106 362 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 RBP2P50120 134 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 KRTAP27-1Q3LI81 207 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 NKAPLQ5M9Q1 402 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 AADACL3Q5VUY0 350 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 C6orf201Q7Z4U5 140 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 ZNF100Q8IYN0 542 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 RELL2Q8NC24 303 aaPredicted RBP12.27□□□□□ -0.44
VRK3-201ENST00000316763 AKR7LQ8NHP1 331 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 TMEM45BQ96B21 275 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 TAAR6Q96RI8 345 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 C1QTNF6Q9BXI9 259 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 OR2H1Q9GZK4 316 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 METTL8Q9H825 291 aaKnown RBP12.27□□□□□ -0.44
VRK3-201ENST00000316763 PCDHB16Q9NRJ7 776 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 GLS2Q9UI32 602 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 MCTS1Q9ULC4 181 aaKnown RBP12.27□□□□□ -0.44
VRK3-201ENST00000316763 HSF4Q9ULV5 492 aa12.27□□□□□ -0.44
VRK3-201ENST00000316763 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 SYNGR4O95473 234 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 SFTPCP11686 197 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 PSG4Q00888 419 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 SNTB1Q13884 538 aaKnown RBP12.27□□□□□ -0.45
VRK3-201ENST00000316763 MOB3CQ70IA8 216 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 CCDC36Q8IYA8 594 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 MAFIPQ8WZ33 124 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 WDR13Q9H1Z4 485 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 SLC7A11Q9UPY5 501 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 MEMO1Q9Y316 297 aa12.27□□□□□ -0.45
VRK3-201ENST00000316763 TEX13DA0A0J9YY54 714 aaPredicted RBP12.26□□□□□ -0.45
VRK3-201ENST00000316763 AQP7O14520 342 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 WISP2O76076 250 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 PET100P0DJ07 73 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 PI3P19957 117 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 GLRA1P23415 457 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 SUPT4H1P63272 117 aaKnown RBP12.26□□□□□ -0.45
VRK3-201ENST00000316763 C3AR1Q16581 482 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 PAN3Q58A45 887 aaKnown RBP12.26□□□□□ -0.45
VRK3-201ENST00000316763 RPUSD3Q6P087 351 aaKnown RBP12.26□□□□□ -0.45
VRK3-201ENST00000316763 Q8NA96 180 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 ZSCAN4Q8NAM6 433 aaPredicted RBP12.26□□□□□ -0.45
VRK3-201ENST00000316763 FNDC9Q8TBE3 224 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 C2orf50Q96LR7 162 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 ZNF75AQ96N20 296 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 TECTBQ96PL2 329 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 DMRTA2Q96SC8 542 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 PRDM14Q9GZV8 571 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 WNT5BQ9H1J7 359 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 RNF122Q9H9V4 155 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 BCO1Q9HAY6 547 aa12.26□□□□□ -0.45
VRK3-201ENST00000316763 DNAJC13O75165 2243 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms