RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MELTFP08582 738 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 CBX5P45973 191 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 CAPZA1P52907 286 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 B2MP61769 119 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 PPP1R1AQ13522 171 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 SNTB1Q13884 538 aaKnown RBP10.76□□□□□ -0.69
RNF4-201ENST00000314289 LDLRAD3Q86YD5 345 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 FAM219AQ8IW50 185 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 OR56B1Q8NGI3 324 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 PPP1R1CQ8WVI7 109 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 ACACAQ13085 2346 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 IGKV1D-8A0A087WSZ0 117 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 NRASP01111 189 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 RRADP55042 308 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 PIGYQ3MUY2 71 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 CCDC36Q8IYA8 594 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 KCNRGQ8N5I3 272 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 BORCS8Q96FH0 119 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 TMEM231Q9H6L2 316 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 APC2O95996 2303 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 ZNF850A8MQ14 1090 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 MFNGO00587 321 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 NAT2P11245 290 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 SOX8P57073 446 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 RSU1Q15404 277 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 PLCXD3Q63HM9 321 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 C11orf87Q6NUJ2 197 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 KCTD9Q7L273 389 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 ZFP62Q8NB50 900 aaPredicted RBP10.76□□□□□ -0.69
RNF4-201ENST00000314289 OR5M8Q8NGP6 311 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 SLC25A21Q9BQT8 299 aaPredicted RBP10.76□□□□□ -0.69
RNF4-201ENST00000314289 FAAP24Q9BTP7 215 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 ASCL3Q9NQ33 180 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 TNFSF18Q9UNG2 199 aa10.76□□□□□ -0.69
RNF4-201ENST00000314289 IGKV3D-15A0A087WSY6 115 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 TRGV5A0A0B4J1U4 118 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 IGKV1-12A0A0C4DH73 117 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 RNF222A6NCQ9 220 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 IGKV1D-12P01611 117 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 CSTBP04080 98 aaKnown RBP10.75□□□□□ -0.69
RNF4-201ENST00000314289 AMY2BP19961 511 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 PCBD1P61457 104 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 RAB1AP62820 205 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 HFEQ30201 348 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 LILRB1Q8NHL6 650 aaPredicted RBP10.75□□□□□ -0.69
RNF4-201ENST00000314289 PECRQ9BY49 303 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 ESRP2Q9H6T0 727 aaKnown RBP10.75□□□□□ -0.69
RNF4-201ENST00000314289 PLEKHJ1Q9NW61 149 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 NDRG3Q9UGV2 375 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 ARHGAP21Q5T5U3 1957 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 SMG1Q96Q15 3661 aaKnown RBP10.75□□□□□ -0.69
RNF4-201ENST00000314289 SHANK1Q9Y566 2161 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 F8W036 122 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 SFTPBP07988 381 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 ADCYAP1P18509 176 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 BLOC1S1P78537 153 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 MEF2DQ14814 521 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 PAN3Q58A45 887 aaKnown RBP10.75□□□□□ -0.69
RNF4-201ENST00000314289 CALHM1Q8IU99 346 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 SVBPQ8N300 66 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 TMEM45BQ96B21 275 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 IP6K3Q96PC2 410 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 PRRT1Q99946 306 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 PIGMQ9H3S5 423 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 PARPBPQ9NWS1 579 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 FBLN5Q9UBX5 448 aa10.75□□□□□ -0.69
RNF4-201ENST00000314289 hCG_38984A0A1B0GV85 526 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 TMEM218A2RU14 115 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 CDRT15L2A8MXV6 281 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 EEF1E1-BLOC1S5C9J1V9 151 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 LINC01387J3KSC0 135 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 OPRM1P35372 400 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 TSC22D1Q15714 1073 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 CSNK2A3Q8NEV1 391 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 IFT22Q9H7X7 185 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 GEMIN2O14893 280 aaKnown RBP10.74□□□□□ -0.69
RNF4-201ENST00000314289 OR2F2O95006 317 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 SERPINA5P05154 406 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 RBP2P50120 134 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 TNFSF10P50591 281 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 IL13RA1P78552 427 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
RNF4-201ENST00000314289 TCF15Q12870 199 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 CLN3Q13286 438 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 OR2F1Q13607 317 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 DEFB109BQ30KR1 87 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 SPATA46Q5T0L3 261 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 OR56B2PQ8NGI1 322 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 WDYHV1Q96HA8 205 aa10.74□□□□□ -0.69
RNF4-201ENST00000314289 PAPOLGQ9BWT3 736 aaKnown RBP10.74□□□□□ -0.69
RNF4-201ENST00000314289 KLF2Q9Y5W3 355 aaPredicted RBP10.74□□□□□ -0.69
RNF4-201ENST00000314289 IGHV3-64DA0A0J9YX35 117 aa10.73□□□□□ -0.69
RNF4-201ENST00000314289 GSTP1P09211 210 aaKnown RBP10.73□□□□□ -0.69
RNF4-201ENST00000314289 HOXA1P49639 335 aaPredicted RBP10.73□□□□□ -0.69
RNF4-201ENST00000314289 RAB13P51153 203 aa10.73□□□□□ -0.69
RNF4-201ENST00000314289 THAP6Q8TBB0 222 aa10.73□□□□□ -0.69
RNF4-201ENST00000314289 CPNE2Q96FN4 548 aaPredicted RBP10.73□□□□□ -0.69
RNF4-201ENST00000314289 CMSS1Q9BQ75 279 aaKnown RBP10.73□□□□□ -0.69
RNF4-201ENST00000314289 MBD2Q9UBB5 411 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms