RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 COMMD5Q9GZQ3 224 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 CTSFQ9UBX1 484 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 KCNK7Q9Y2U2 307 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 CEACAM5P06731 702 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 RPS4Y1P22090 263 aaKnown RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 NNATQ16517 81 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 C12orf54Q6X4T0 127 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 OR2T10Q8NGZ9 312 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 NPAS1Q99742 590 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 FAM173AQ9BQD7 235 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 STARD10Q9Y365 291 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 HIST1H1BP16401 226 aaKnown RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 LILRA6Q6PI73 481 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 OR4S2Q8NH73 311 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 GPR119Q8TDV5 335 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 TREM2Q9NZC2 230 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 GNG13Q9P2W3 67 aa7.87□□□□□ -1.15
COL6A5-202ENST00000312481 COA3Q9Y2R0 106 aaPredicted RBP7.87□□□□□ -1.15
COL6A5-202ENST00000312481 SLC31A2O15432 143 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ETHE1O95571 254 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 HHIPQ96QV1 700 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 TRBV5-5A0A0J9YX44 114 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 SPTY2D1-AS1A0A0U1RR47 76 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM272A0A1B0GTI8 110 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 FAM24AA6NFZ4 105 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 CDC14BO60729 498 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 QDPRP09417 244 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
COL6A5-202ENST00000312481 A0A1W2PPC4 97 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 LINC01549A6NIU2 74 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 RPL29P47914 159 aaKnown RBP7.86□□□□□ -1.15
COL6A5-202ENST00000312481 PNPLA1Q8N8W4 532 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 SORBS1Q9BX66 1292 aaKnown RBP7.86□□□□□ -1.15
COL6A5-202ENST00000312481 GAL3ST2Q9H3Q3 398 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 PSENENQ9NZ42 101 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ARHGAP21Q5T5U3 1957 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 MED13LQ71F56 2210 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 TRGV10A0A0A0MS01 117 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 K7ERU9 68 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ACTL6AO96019 429 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM268Q5VZI3 342 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 HOGA1Q86XE5 327 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 IL1F10Q8WWZ1 152 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 TBC1D29Q9UFV1 150 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 CTXND1A0A1B0GTU2 59 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ADAM11O75078 769 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 FCARP24071 287 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 RAB9AP51151 201 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 B4GALNT1Q00973 533 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF90Q03938 601 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ZNF385BQ569K4 471 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ATG4DQ86TL0 474 aaPredicted RBP7.86□□□□□ -1.15
COL6A5-202ENST00000312481 C21orf140B9A014 251 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 PLPP3O14495 311 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 CXorf1O96002 111 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 SRSF7Q16629 238 aaKnown RBP eCLIP7.86□□□□□ -1.15
COL6A5-202ENST00000312481 UNQ9370/PRO34162Q6UXP9 181 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 ZDHHC11Q9H8X9 412 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 A0A1B0GW15 77 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 A0A1W2PNV4 684 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 H0Y980 276 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 CHEK1O14757 476 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 DHHO43323 396 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 CLEC2LP0C7M8 214 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 HABP2Q14520 560 aaPredicted RBP7.86□□□□□ -1.15
COL6A5-202ENST00000312481 NUDT22Q9BRQ3 303 aa7.86□□□□□ -1.15
COL6A5-202ENST00000312481 SLC22A20A6NK97 555 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 ZFP92A6NM28 416 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 NKG7Q16617 165 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 PRTGQ2VWP7 1150 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 KIRREL2Q6UWL6 708 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 UBE3DQ7Z6J8 389 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 RHBDD1Q8TEB9 315 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 TMEM38BQ9NVV0 291 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 NUP210LQ5VU65 1888 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 COX5BP10606 129 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 NHLRC3Q5JS37 347 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 AAMDCQ9H7C9 122 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 PPP1R14DQ9NXH3 145 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 TEX50A0A1B0GTY4 177 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 MAP1LC3B2A6NCE7 125 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 HLA-DQA1P01909 254 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OPN1LWP04000 364 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 PRF1P14222 555 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 ARSAP15289 507 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 ATG101Q9BSB4 218 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 MAP1LC3BQ9GZQ8 125 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR5H15A6NDH6 313 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR5H1A6NKK0 313 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 M0QYG6 137 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR10J1P30954 320 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 GNG4P50150 75 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 RNF4P78317 190 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 HLA-BQ31612 363 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 RNF175Q8N4F7 328 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 LSM10Q969L4 123 aaKnown RBP7.85□□□□□ -1.15
COL6A5-202ENST00000312481 OR10C1Q96KK4 312 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 SLCO1C1Q9NYB5 712 aa7.85□□□□□ -1.15
COL6A5-202ENST00000312481 GAB2Q9UQC2 676 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms