RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 C19orf53Q9UNZ5 99 aaPredicted RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 LSM2Q9Y333 95 aaKnown RBP7.31□□□□□ -1.24
VPS41-202ENST00000310301 C5orf52A6NGY3 159 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 FCMRO60667 390 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 DUS4LO95620 317 aaKnown RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 GPANK1O95872 356 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 NDUFB7P17568 137 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 SLC6A1P30531 599 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 FGF9P31371 208 aaPredicted RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 PLA2G5P39877 138 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 GNG4P50150 75 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 METAP1P53582 386 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 ACVR1Q04771 509 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 LYPD8Q6UX82 237 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 OR52N5Q8NH56 324 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 PRR7Q8TB68 274 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 MS4A6EQ96DS6 147 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 COX14Q96I36 57 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 NEUROG3Q9Y4Z2 214 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 KNL1Q8NG31 2342 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 GREB1LQ9C091 1923 aaPredicted RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 IGHV3-64DA0A0J9YX35 117 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 TMEM272A0A1B0GTI8 110 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 M0R135 149 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 NEURL1O76050 574 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 IGF2P01344 180 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 FBP1P09467 338 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 GABRA1P14867 456 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 PSMB2P49721 201 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 MVDP53602 400 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 SPCS3P61009 180 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 INPP5JQ15735 1006 aaPredicted RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 DMRTC1Q5HYR2 192 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 SH2D5Q6ZV89 423 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 TRILQ7L0X0 811 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 ARHGEF39Q8N4T4 335 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 ZNF799Q96GE5 643 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 ATP5SQ99766 215 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 C1QTNF6Q9BXI9 259 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 FBXL17Q9UF56 701 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 PROCRQ9UNN8 238 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 ST3GAL6Q9Y274 331 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 OR2M5A3KFT3 312 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 CDRT15L2A8MXV6 281 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 TBXA2RP21731 343 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 PCMT1P22061 227 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 PCP4P48539 62 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 OR1C1Q15619 314 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 WDR73Q6P4I2 378 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 PRSS54Q6PEW0 395 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 OR2T10Q8NGZ9 312 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 SLC25A43Q8WUT9 341 aaPredicted RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 SIRT5Q9NXA8 310 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 PAM16Q9Y3D7 125 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 NUMA1Q14980 2115 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 C7orf77A4D0Y5 90 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 RAB29O14966 203 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 ATXN7O15265 892 aaPredicted RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 STAG3L2P0CL84 134 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 SULT1A1P50225 295 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 AGFG1P52594 562 aaKnown RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 SUCLG1P53597 346 aaKnown RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 DLK1P80370 383 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 SFTPA1Q8IWL2 248 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 D2HGDHQ8N465 521 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 FBXO17Q96EF6 278 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 WDR61Q9GZS3 305 aaKnown RBP7.3□□□□□ -1.24
VPS41-202ENST00000310301 THSD7BQ9C0I4 1608 aa7.3□□□□□ -1.24
VPS41-202ENST00000310301 ADAM20O43506 726 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 SPRY1O43609 319 aaPredicted RBP7.29□□□□□ -1.24
VPS41-202ENST00000310301 COX6B1P14854 86 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 BMP5P22003 454 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 HTR1DP28221 377 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 OSR2Q8N2R0 312 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 STARD4Q96DR4 205 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 FAAP24Q9BTP7 215 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 VN1R1Q9GZP7 353 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 MTFP1Q9UDX5 166 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 LIPGQ9Y5X9 500 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 FAM24AA6NFZ4 105 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 SERPINE3A8MV23 424 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 K7ERU9 68 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 TMPRSS11DO60235 418 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 CXCL3P19876 107 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 EMDP50402 254 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 CD81P60033 236 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 RPS23P62266 143 aaKnown RBP7.29□□□□□ -1.24
VPS41-202ENST00000310301 CLN3Q13286 438 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 HLA-DRB5Q30154 266 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 LGALSLQ3ZCW2 172 aaPredicted RBP7.29□□□□□ -1.24
VPS41-202ENST00000310301 ZNF628Q5EBL2 1059 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 OR5AU1Q8NGC0 362 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 OR5D13Q8NGL4 314 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 MCHR2Q969V1 340 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 COMMD5Q9GZQ3 224 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 TMEM191AQ9H0A3 160 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 LPAR5Q9H1C0 372 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 SIPA1L1O43166 1804 aa7.29□□□□□ -1.24
VPS41-202ENST00000310301 H3BVH4 76 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms