RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 DAPL1A0PJW8 107 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 CHRM2P08172 466 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 ACTC1P68032 377 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 ACTA1P68133 377 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 DEFA6Q01524 100 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 EDDM3AQ14507 147 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 ASPHD2Q6ICH7 369 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 SLC35E4Q6ICL7 350 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 EGFL6Q8IUX8 553 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 TRUB1Q8WWH5 349 aaKnown RBP15.87■□□□□ 0.13
LIME1-201ENST00000309546 PP6455Q8WZ26 134 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 C10orf35Q96D05 121 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 AJUBAQ96IF1 538 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 HRASLS5Q96KN8 279 aa15.87■□□□□ 0.13
LIME1-201ENST00000309546 H3BNX3 289 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 ZNF737O75373 536 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 ZNF20P17024 532 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 GABRA5P31644 462 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 ATP1B3P54709 279 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 SNU13P55769 128 aaKnown RBP15.86■□□□□ 0.13
LIME1-201ENST00000309546 PLA1AQ53H76 456 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 OR2G2Q8NGZ5 317 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 ADAT3Q96EY9 351 aaPredicted RBP15.86■□□□□ 0.13
LIME1-201ENST00000309546 MEGF9Q9H1U4 602 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 MMP27Q9H306 513 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 IL36RNQ9UBH0 155 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 MEGF8Q7Z7M0 2845 aa15.86■□□□□ 0.13
LIME1-201ENST00000309546 WNK1Q9H4A3 2382 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 SLC16A6O15403 523 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 HAND1O96004 215 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 CYB5AP00167 134 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 ARG1P05089 322 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 HTR1AP08908 422 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 OCM2P0CE71 109 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 OCMP0CE72 109 aaPredicted RBP15.85■□□□□ 0.13
LIME1-201ENST00000309546 AZGP1P25311 298 aaKnown RBP15.85■□□□□ 0.13
LIME1-201ENST00000309546 RBP2P50120 134 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 ALDH3A2P51648 485 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 OR12D2P58182 307 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 TMEM244Q5VVB8 128 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 MEDAGQ5VYS4 303 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 ZFP1Q6P2D0 407 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 LHFPL4Q7Z7J7 247 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 OR8H2Q8N162 312 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 CBR4Q8N4T8 237 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 OR4C13Q8NGP0 309 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 RNF166Q96A37 237 aaPredicted RBP15.85■□□□□ 0.13
LIME1-201ENST00000309546 RBFOX1Q9NWB1 397 aaKnown RBP15.85■□□□□ 0.13
LIME1-201ENST00000309546 FRRS1LQ9P0K9 344 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 AASSQ9UDR5 926 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 SIGLEC9Q9Y336 463 aa15.85■□□□□ 0.13
LIME1-201ENST00000309546 TET2Q6N021 2002 aaPredicted RBP15.85■□□□□ 0.13
LIME1-201ENST00000309546 TMEM82A0PJX8 343 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 C17orf98A8MV24 154 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 IGHA1P01876 353 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 ZNF728P0DKX0 622 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 CALCBP10092 127 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 ATF1P18846 271 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 BCL3P20749 454 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 GABRR1P24046 479 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 DUSP1P28562 367 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 DLX6P56179 175 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 MTCP1P56278 107 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 NANOS3P60323 173 aaKnown RBP15.84■□□□□ 0.13
LIME1-201ENST00000309546 SNRPGP62308 76 aaKnown RBP15.84■□□□□ 0.13
LIME1-201ENST00000309546 CCDC121Q6ZUS5 278 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 Q8IYB0 196 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 TPRX1Q8N7U7 411 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 PPP1R35Q8TAP8 253 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 RFT1Q96AA3 541 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 FGGYQ96C11 551 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 SNX22Q96L94 193 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 CHST6Q9GZX3 395 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 RAB18Q9NP72 206 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 GMPPBQ9Y5P6 360 aa15.84■□□□□ 0.13
LIME1-201ENST00000309546 IGKV1-9A0A0C4DH69 117 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 SNTNA6NMZ2 147 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 J3QLW9 94 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 TSPAN15O95858 294 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 ZNF19P17023 458 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 PRKACAP17612 351 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 PRKACBP22694 351 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 NPBWR2P48146 333 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 GRK1Q15835 563 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 AANATQ16613 207 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 OCLNQ16625 522 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 LHFPL2Q6ZUX7 228 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 KCTD20Q7Z5Y7 419 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 ENTHD1Q8IYW4 607 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 FAM58AQ8N1B3 248 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 DNAAF1Q8NEP3 725 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 OR13C3Q8NGS6 347 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 OR13D1Q8NGV5 346 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 C4orf36Q96KX1 117 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 ZNF714Q96N38 554 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 OPALINQ96PE5 141 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 NKX3-1Q99801 234 aaPredicted RBP15.83■□□□□ 0.12
LIME1-201ENST00000309546 FBLN5Q9UBX5 448 aa15.83■□□□□ 0.12
LIME1-201ENST00000309546 TRBV2A0A0J9YWF9 115 aa15.82■□□□□ 0.12
LIME1-201ENST00000309546 J3QRE1 110 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms