RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SNX22Q96L94 193 aa9.25□□□□□ -0.93
SMIM4-201ENST00000307106 PARD6BQ9BYG5 372 aa9.25□□□□□ -0.93
SMIM4-201ENST00000307106 NMNAT2Q9BZQ4 307 aa9.25□□□□□ -0.93
SMIM4-201ENST00000307106 TMBIM4Q9HC24 238 aa9.25□□□□□ -0.93
SMIM4-201ENST00000307106 AP3M1Q9Y2T2 418 aa9.25□□□□□ -0.93
SMIM4-201ENST00000307106 CDH10Q9Y6N8 788 aa9.25□□□□□ -0.93
SMIM4-201ENST00000307106 A0A0G2JND7 137 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 TMEM82A0PJX8 343 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 TRIM64CA6NLI5 447 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 BUB1B-PAK6H3BSN5 160 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 FGF16O43320 207 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 GP9P14770 177 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 SPNP16150 400 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 NCK1P16333 377 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 MYF6P23409 242 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 IFNGR2P38484 337 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 SMIM11AP58511 58 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 RIPPLY1Q0D2K3 151 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 KLF10Q13118 480 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 MAPRE2Q15555 327 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 PNLIPRP3Q17RR3 467 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 ZNF684Q5T5D7 378 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 PRAMEF5Q5TYX0 476 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 RPL13AP3Q6NVV1 102 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 SHFQ7M4L6 423 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 ARPINQ7Z6K5 226 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 COMMD2Q86X83 199 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 SLC15A3Q8IY34 581 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 OR11H1Q8NG94 326 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 TRMT10AQ8TBZ6 339 aaKnown RBP9.24□□□□□ -0.93
SMIM4-201ENST00000307106 C4orf3Q8WVX3 66 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 DYDC1Q8WWB3 177 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 ISYNA1Q9NPH2 558 aa9.24□□□□□ -0.93
SMIM4-201ENST00000307106 DCAF13Q9NV06 445 aaKnown RBP9.24□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A18PA6NE21 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A16PA6NEW6 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A20PA6NIJ5 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 LINC01548A6NM66 108 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A9PA6NNJ1 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A12PA8MX19 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A5PA8MXJ8 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 OOSP1A8MZH6 123 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 LY6LH3BQJ8 138 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 TOR1AO14656 332 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 GSC2O15499 205 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 NRASP01111 189 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 LYNP07948 512 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A15PP0C7V4 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A13PP0C7W8 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A14PP0C7W9 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 FAM90A24PP0C7X0 464 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 TMEM11P17152 192 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 NUDT2P50583 147 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 ERVK11-1P61568 191 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 GPR50Q13585 617 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 HES1Q14469 280 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 GRK1Q15835 563 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 HLA-DRB5Q30154 266 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 LCN1P1Q5VSP4 162 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 ZNF429Q86V71 674 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 THNSL2Q86YJ6 484 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 OR8D4Q8NGM9 314 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 RP9Q8TA86 221 aaKnown RBP9.23□□□□□ -0.93
SMIM4-201ENST00000307106 GON7Q9BXV9 100 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 CHST6Q9GZX3 395 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 ZNF286AQ9HBT8 521 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 IL20Q9NYY1 176 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 ENPP5Q9UJA9 477 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 PIGLQ9Y2B2 252 aa9.23□□□□□ -0.93
SMIM4-201ENST00000307106 UBE2J1Q9Y385 318 aaPredicted RBP9.23□□□□□ -0.93
SMIM4-201ENST00000307106 A0A0U1RQV5 110 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 AP4M1O00189 453 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 NME4O00746 187 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 IGHA1P01876 353 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 ELANEP08246 267 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 ATP6V1B1P15313 513 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 CDK2P24941 298 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 MPZP25189 248 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 PEX2P28328 305 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 CD34P28906 385 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 GSTT1P30711 240 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 FOXE3Q13461 319 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 RBM39Q14498 530 aaKnown RBP9.22□□□□□ -0.93
SMIM4-201ENST00000307106 SRSF7Q16629 238 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMIM4-201ENST00000307106 ASRGL1Q7L266 308 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 TRPM8Q7Z2W7 1104 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 RNF152Q8N8N0 203 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 OR52N4Q8NGI2 321 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 THEM6Q8WUY1 208 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 DDB2Q92466 427 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 ITFG2Q969R8 447 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 RCN3Q96D15 328 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 SPATA25Q9BR10 227 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 GAL3ST2Q9H3Q3 398 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 MRGBPQ9NV56 204 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 RYR1P21817 5038 aa9.22□□□□□ -0.93
SMIM4-201ENST00000307106 PQLC2LA1A4F0 135 aa9.21□□□□□ -0.94
SMIM4-201ENST00000307106 PRR23D1E9PI22 279 aaPredicted RBP9.21□□□□□ -0.94
SMIM4-201ENST00000307106 F8VVB4 439 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms