RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ECH1Q13011 328 aa13.57□□□□□ -0.24
CHAF1A-201ENST00000301280 SNTB1Q13884 538 aaKnown RBP13.57□□□□□ -0.24
CHAF1A-201ENST00000301280 HIKESHIQ53FT3 197 aa13.57□□□□□ -0.24
CHAF1A-201ENST00000301280 METTL9Q9H1A3 318 aa13.57□□□□□ -0.24
CHAF1A-201ENST00000301280 ANAPC10Q9UM13 185 aa13.57□□□□□ -0.24
CHAF1A-201ENST00000301280 TLN1Q9Y490 2541 aaKnown RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 CNOT4O95628 575 aaKnown RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 CYC1P08574 325 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 FGF5P12034 268 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 AGTR1P30556 359 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 RBP2P50120 134 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 CAV2P51636 162 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 IZUMO4Q1ZYL8 232 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 RPL7L1Q6DKI1 246 aaKnown RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 CALHM1Q8IU99 346 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 CNEP1R1Q8N9A8 125 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 MRPL24Q96A35 216 aaKnown RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 RFNGQ9Y644 331 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 CACNA1BQ00975 2339 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 F8W036 122 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 PHF1O43189 567 aaPredicted RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 C1QL1O75973 258 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 CCL11P51671 97 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 BLOC1S1P78537 153 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 RBM39Q14498 530 aaKnown RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 TMEM128Q5BJH2 165 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 UQCC2Q9BRT2 126 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 FAM117AQ9C073 453 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 ANKRD11Q6UB99 2663 aaPredicted RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 H0YIZ8 118 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 RPS16P62249 146 aaKnown RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 GUCA2BQ16661 112 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 LTC4SQ16873 150 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 IGSF11Q5DX21 431 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 MRPL21Q7Z2W9 205 aaKnown RBP13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 OR2V1Q8NHB1 315 aa13.56□□□□□ -0.24
CHAF1A-201ENST00000301280 IGKV1-27A0A075B6S5 117 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 CD8AP01732 235 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 HLA-GP17693 338 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 HAGHLQ6PII5 290 aaPredicted RBP13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 ACOT7LQ6ZUV0 252 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 SGPP2Q8IWX5 399 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 RCL1Q9Y2P8 373 aaKnown RBP13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 NCOR2Q9Y618 2525 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 HSD17B6O14756 317 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 LRP3O75074 770 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 RPS27AP62979 156 aaKnown RBP13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 FGL1Q08830 312 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 OR1C1Q15619 314 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 PLEKHN1Q494U1 663 aaPredicted RBP13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 ZFP82Q8N141 532 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 ZSCAN4Q8NAM6 433 aaPredicted RBP13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 ANGPTL4Q9BY76 406 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 NKX6-2Q9C056 277 aaPredicted RBP13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 STRADBQ9C0K7 418 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 OR14J1Q9UGF5 321 aa13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 FBXO9Q9UK97 447 aaPredicted RBP13.55□□□□□ -0.24
CHAF1A-201ENST00000301280 F8VVB4 439 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 F8VWA3 439 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 LINC01387J3KSC0 135 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 MED6O75586 246 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 IGHV3-13P01766 116 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 IGHV3-7P01780 117 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 TFF1P04155 84 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 HERV-K104P61576 105 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 SPEM2Q0P670 501 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 SMCO1Q147U7 214 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 LYZL2Q7Z4W2 148 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 OR51H1Q8NH63 302 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 SLC25A32Q9H2D1 315 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 CRIM1Q9NZV1 1036 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 CD63P08962 238 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 OR5AC1P0C628 307 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 ZNF44P15621 663 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 GNRHRP30968 328 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 GSK3AP49840 483 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 RAC3P60763 192 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 HIST3H3Q16695 136 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 OR2T2Q6IF00 324 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 ZNF611Q8N823 705 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 SSC4DQ8WTU2 575 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 MITD1Q8WV92 249 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 TMEM230Q96A57 120 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 KLF2Q9Y5W3 355 aaPredicted RBP13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 NME2P1O60361 137 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 SYNGR4O95473 234 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 CRHP06850 196 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 GP1BAP07359 652 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 CNR1P21554 472 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 KCNMB1Q16558 191 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 OR2B11Q5JQS5 317 aa13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 PUSL1Q8N0Z8 303 aaKnown RBP13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 CPEB3Q8NE35 698 aaKnown RBP13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 MARS2Q96GW9 593 aaKnown RBP13.54□□□□□ -0.24
CHAF1A-201ENST00000301280 ABCD4O14678 606 aa13.53□□□□□ -0.24
CHAF1A-201ENST00000301280 HSPA12AO43301 675 aa13.53□□□□□ -0.24
CHAF1A-201ENST00000301280 IFNA21P01568 189 aa13.53□□□□□ -0.24
CHAF1A-201ENST00000301280 FHITP49789 147 aa13.53□□□□□ -0.24
CHAF1A-201ENST00000301280 RAB1AP62820 205 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms