RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 DEFB133Q30KQ1 61 aa16.7■□□□□ 0.26
TRA2A-201ENST00000297071 DPPA3Q6W0C5 159 aa16.7■□□□□ 0.26
TRA2A-201ENST00000297071 C16orf47Q6ZP98 133 aaPredicted RBP16.7■□□□□ 0.26
TRA2A-201ENST00000297071 SYT13Q7L8C5 426 aa16.7■□□□□ 0.26
TRA2A-201ENST00000297071 OR13D1Q8NGV5 346 aa16.7■□□□□ 0.26
TRA2A-201ENST00000297071 BOD1Q96IK1 185 aa16.7■□□□□ 0.26
TRA2A-201ENST00000297071 LIME1Q9H400 295 aa16.7■□□□□ 0.26
TRA2A-201ENST00000297071 AK3Q9UIJ7 227 aa16.7■□□□□ 0.26
TRA2A-201ENST00000297071 DUXBA0A1W2PPF3 345 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 METTL12A8MUP2 240 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 SHISA8B8ZZ34 492 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 VAMP5O95183 116 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 CSNK1A1P48729 337 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 OR1D5P58170 312 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 H3F3AP84243 136 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 CNN3Q15417 329 aaKnown RBP16.69■□□□□ 0.26
TRA2A-201ENST00000297071 RSPO1Q2MKA7 263 aaPredicted RBP16.69■□□□□ 0.26
TRA2A-201ENST00000297071 WDR74Q6RFH5 385 aaPredicted RBP16.69■□□□□ 0.26
TRA2A-201ENST00000297071 LYZL2Q7Z4W2 148 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 SPTSSAQ969W0 71 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 NABP1Q96AH0 204 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 SLC2A9Q9NRM0 540 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 TREM2Q9NZC2 230 aa16.69■□□□□ 0.26
TRA2A-201ENST00000297071 TRBV11-1A0A0K0K1C0 115 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.68■□□□□ 0.26
TRA2A-201ENST00000297071 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.68■□□□□ 0.26
TRA2A-201ENST00000297071 A0A1W2PPE2 198 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 RBFOX3A6NFN3 312 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF850A8MQ14 1090 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF814B7Z6K7 855 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 TGOLN2O43493 480 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ZFAND5O76080 213 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 GABRR1P24046 479 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 EWSR1Q01844 656 aaKnown RBP eCLIP16.68■□□□□ 0.261e-8■□□□□ 8.4
TRA2A-201ENST00000297071 CARD17Q5XLA6 110 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 C7orf61Q8IZ16 206 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 SPIN2AQ99865 258 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 SPIN2BQ9BPZ2 258 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 METTL7AQ9H8H3 244 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF286AQ9HBT8 521 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 FGF21Q9NSA1 209 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF391Q9UJN7 358 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 RCL1Q9Y2P8 373 aaKnown RBP16.68■□□□□ 0.26
TRA2A-201ENST00000297071 C5orf42Q9H799 3197 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 CEP192Q8TEP8 1941 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF732B4DXR9 585 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 TOX3O15405 576 aaPredicted RBP16.68■□□□□ 0.26
TRA2A-201ENST00000297071 TXNL1O43396 289 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 DKK1O94907 266 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 CEACAM1P13688 526 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 SHBQ15464 509 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 SRSF7Q16629 238 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRA2A-201ENST00000297071 IGSF11Q5DX21 431 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ACER2Q5QJU3 275 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 LHFPL2Q6ZUX7 228 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 OR2C3Q8N628 320 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 OR10G4Q8NGN3 311 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 CD300LFQ8TDQ1 290 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 WDR77Q9BQA1 342 aaPredicted RBP16.68■□□□□ 0.26
TRA2A-201ENST00000297071 GGACTQ9BVM4 153 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 SLC25A31Q9H0C2 315 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 ELL3Q9HB65 397 aaPredicted RBP16.68■□□□□ 0.26
TRA2A-201ENST00000297071 FBXO7Q9Y3I1 522 aa16.68■□□□□ 0.26
TRA2A-201ENST00000297071 IGHV3-20A0A0C4DH32 117 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 A0A1W2PNR3 127 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 C5orf63A6NC05 138 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 M0R135 149 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 HSPA12AO43301 675 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 F10P00742 488 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 HSPB1P04792 205 aaKnown RBP16.67■□□□□ 0.26
TRA2A-201ENST00000297071 ARG1P05089 322 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 DAOP14920 347 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 RND3P61587 244 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 RSU1Q15404 277 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 TMEM211Q6ICI0 200 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 SPSB3Q6PJ21 355 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 Q6ZS49 121 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.67■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF100Q8IYN0 542 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 FBXL14Q8N1E6 418 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 OR14L1PQ8NHC6 308 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 PIGTQ969N2 578 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF799Q96GE5 643 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 HDHD3Q9BSH5 251 aaPredicted RBP16.67■□□□□ 0.26
TRA2A-201ENST00000297071 PARPBPQ9NWS1 579 aa16.67■□□□□ 0.26
TRA2A-201ENST00000297071 CLEC18AA5D8T8 446 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 B4DEV8 164 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 PPP1CCP36873 323 aaKnown RBP16.66■□□□□ 0.26
TRA2A-201ENST00000297071 MTCP1P56278 107 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 CLDN17P56750 224 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 NXPH1P58417 271 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 KIAA0141Q14154 515 aaPredicted RBP16.66■□□□□ 0.26
TRA2A-201ENST00000297071 EXT1Q16394 746 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 ZNF506Q5JVG8 444 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 CLEC18CQ8NCF0 446 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 FAM213BQ8TBF2 198 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 NPRL2Q8WTW4 380 aa16.66■□□□□ 0.26
TRA2A-201ENST00000297071 GNPNAT1Q96EK6 184 aaPredicted RBP16.66■□□□□ 0.26
TRA2A-201ENST00000297071 FAAP24Q9BTP7 215 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms