RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 OSR2Q8N2R0 312 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF565Q8N9K5 539 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ANGPTL6Q8NI99 470 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 TMEM54Q969K7 222 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ZPBPQ9BS86 351 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 KCNIP3Q9Y2W7 256 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 OR6C6A6NF89 314 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 SCGNO76038 276 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ATF4P18848 351 aaPredicted RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 PIGPP57054 158 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 FOXL2NBQ6ZUU3 175 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 MKXQ8IYA7 352 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ZBTB44Q8NCP5 570 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 OR11L1Q8NGX0 322 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 OR13G1Q8NGZ3 307 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 HRH4Q9H3N8 390 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 SH2D2AQ9NP31 389 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 DUSP13Q9UII6 198 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 UBE2J1Q9Y385 318 aaPredicted RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 PLCE1Q9P212 2302 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 CFAP47Q6ZTR5 3102 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 TRAPPC2LH3BP13 241 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 PHF1O43189 567 aaPredicted RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 CRYZL1O95825 349 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 IGLV3-1P01715 115 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 PSMB6P28072 239 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 AGTR1P30556 359 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 PRDX4Q13162 271 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 RAB32Q13637 225 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 FAM189A2Q15884 450 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 TMEM128Q5BJH2 165 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ZSCAN4Q8NAM6 433 aaPredicted RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 SCGB3A2Q96PL1 93 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 SF3B5Q9BWJ5 86 aaKnown RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ALX4Q9H161 411 aaPredicted RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 C5orf66Q9H5L9 145 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 SDHAF2Q9NX18 166 aa8.07□□□□□ -1.12
PRDM9-201ENST00000296682 FBXO9Q9UK97 447 aaPredicted RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 KLF13Q9Y2Y9 288 aaPredicted RBP8.07□□□□□ -1.12
PRDM9-201ENST00000296682 ANKRD30BLA7E2S9 258 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 HSD17B6O14756 317 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 UBBP0CG47 229 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF728P0DKX0 622 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 TAS2R46P59540 309 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 FAM3AP98173 230 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 HOXA4Q00056 320 aaPredicted RBP8.06□□□□□ -1.12
PRDM9-201ENST00000296682 FGL1Q08830 312 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 FOXO1Q12778 655 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 C11orf87Q6NUJ2 197 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 OR5M8Q8NGP6 311 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 WNT2BQ93097 391 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 TREM1Q9NP99 234 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 OBP2BQ9NPH6 170 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 LAMA5O15230 3695 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 IGKV1-27A0A075B6S5 117 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 RFPL4AA6NLU0 287 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 RFPL4AL1F8VTS6 287 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 SYNGR3O43761 229 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 CALCRP30988 508 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 C10orf128Q5T292 105 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 SLC25A42Q86VD7 318 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 FDCSPQ8NFU4 85 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 OR5AP2Q8NGF4 316 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 RBPMSQ93062 196 aaKnown RBP8.06□□□□□ -1.12
PRDM9-201ENST00000296682 WBP1Q96G27 269 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 SLC5A7Q9GZV3 580 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 MAGT1Q9H0U3 335 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 NARFLQ9H6Q4 476 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF703Q9H7S9 590 aaPredicted RBP8.06□□□□□ -1.12
PRDM9-201ENST00000296682 CDH20Q9HBT6 801 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 TLN1Q9Y490 2541 aaKnown RBP8.06□□□□□ -1.12
PRDM9-201ENST00000296682 SPTBN4Q9H254 2564 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 NCOR2Q9Y618 2525 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF816-ZNF321PA0A0X1KG74 233 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 SIRPB1O00241 398 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 BCL3P20749 454 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 IGSF11Q5DX21 431 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 LY6G6FQ5SQ64 297 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 OR51H1Q8NH63 302 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 ST8SIA2Q92186 375 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 GPR87Q9BY21 358 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 BCO1Q9HAY6 547 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 FOXD3Q9UJU5 478 aaPredicted RBP8.06□□□□□ -1.12
PRDM9-201ENST00000296682 KCNS2Q9ULS6 477 aa8.06□□□□□ -1.12
PRDM9-201ENST00000296682 DMXL1Q9Y485 3027 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 LINC00862A6NCI5 91 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 ZNF705EA8MWA4 302 aaPredicted RBP8.05□□□□□ -1.12
PRDM9-201ENST00000296682 F8VVB4 439 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 F8VWA3 439 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 SYNGR1O43759 233 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 PRH1P02810 166 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 CST2P09228 141 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 FTH1P19P0C7X4 201 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 NME2P22392 152 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 ZBTB25P24278 435 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 CAV2P51636 162 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 ERVS71-1P61550 626 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 QRFPP83859 136 aa8.05□□□□□ -1.12
PRDM9-201ENST00000296682 AANATQ16613 207 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms