RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CTAG2O75638 210 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 DXOO77932 396 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 LY86O95711 162 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 WNT11O96014 354 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 CYB561P49447 251 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 BPIFB3P59826 476 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 RUNX2Q13950 521 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 TMEM183BQ1AE95 376 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC25A26Q70HW3 274 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 TIPARPQ7Z3E1 657 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 EDARADDQ8WWZ3 215 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ARSGQ96EG1 525 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 PIK3IP1Q96FE7 263 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 TRAPPC1Q9Y5R8 145 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 DHHO43323 396 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF250P15622 560 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF121P58317 390 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR8G1Q15617 311 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 IGSF11Q5DX21 431 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 VHLLQ6RSH7 139 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 TCTEX1D1Q8N7M0 179 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 LINC01555Q8NAE3 123 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 LRP12Q9Y561 859 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ANKUB1A6NFN9 424 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 FRG2CA6NGY1 282 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 LRRC30A6NM36 301 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 KLRC4-KLRK1H3BQV0 150 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 FBP1P09467 338 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNF17P17021 662 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ABCD3P28288 659 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 CLDN15P56746 228 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 MLF1P58340 268 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 PNRC1Q12796 327 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 TMEM241Q24JQ0 296 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR5M9Q8NGP3 310 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 M1APQ8TC57 530 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 NT5CQ8TCD5 201 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 TAAR6Q96RI8 345 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 HDGFL3Q9Y3E1 203 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 PCNX2A6NKB5 2137 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 PCDH15Q96QU1 1955 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 PTHLHP12272 177 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 HIST1H1DP16402 221 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 FUT3P21217 361 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ARR3P36575 388 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 PCBP3P57721 371 aaKnown RBP10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 CLN3Q13286 438 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 RAB32Q13637 225 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR8B8Q15620 311 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 WDR38Q5JTN6 314 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 NHLRC1Q6VVB1 395 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 SLC16A13Q7RTY0 426 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 OR1L3Q8NH93 324 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ERGIC1Q969X5 290 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 GPR137Q96N19 417 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 MS4A10Q96PG2 267 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 RAB40CQ96S21 281 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 ADAMTS9Q9P2N4 1935 aa10.53□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A1W2PNR3 127 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 DEFA4P12838 97 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 FUT6P51993 359 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 PPP1CAP62136 330 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 MOB1BQ7L9L4 216 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 NHLRC2Q8NBF2 726 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 TMEM178AQ8NBL3 297 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 ZNRF4Q8WWF5 429 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 S1PR3Q99500 378 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 LHX9Q9NQ69 397 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 LANCL2Q9NS86 450 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 RASL12Q9NYN1 266 aa10.52□□□□□ -0.72
SYNGAP1-201ENST00000293748 A0A1W2PPH5 198 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 IDSB3KWA1 339 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 H3BP45 60 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 ABCD4O14678 606 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 DKK1O94907 266 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 SFTPCP11686 197 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 IL13RA2Q14627 380 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 RHBDD2Q6NTF9 364 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 C11orf40Q8WZ69 217 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 KCNE1BA0A087WTH5 132 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 AQP7P3A6NL99 342 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 NKX2-2O95096 273 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 OPN1MWP04001 364 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 CST2P09228 141 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 OPN1MW2P0DN77 364 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 OPN1MW3P0DN78 364 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 CCKARP32238 428 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 CNN1P51911 297 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 C21orf58P58505 322 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZDHHC23Q8IYP9 409 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF501Q96CX3 271 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 MMP25Q9NPA2 562 aa10.52□□□□□ -0.73
SYNGAP1-201ENST00000293748 DBX1A6NMT0 343 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 TERTO14746 1132 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 HNF1AP20823 631 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 RPL29P47914 159 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 PTTG1IPP53801 180 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 RAE1P78406 368 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 ERHP84090 104 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms