RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZNF658BQ4V348 819 aaPredicted RBP11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 GUSBP11Q6P575 273 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 MRGPREQ86SM8 312 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF485Q8NCK3 441 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 SMIM10Q96HG1 83 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 PHF7Q9BWX1 381 aaPredicted RBP11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 RCL1Q9Y2P8 373 aaKnown RBP11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 SLCO1B1Q9Y6L6 691 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 GP1BAP07359 652 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF133P52736 654 aaPredicted RBP11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 TMEM33P57088 247 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 GRB2P62993 217 aaKnown RBP11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 MGAT2Q10469 447 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 MPPED2Q15777 294 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 DCAF12L2Q5VW00 463 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 LINC00696Q6ZRV3 163 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 CALHM2Q9HA72 323 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 HIF1ANQ9NWT6 349 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 GPR179Q6PRD1 2367 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 TBPP20226 339 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 APLNRP35414 380 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 CD200P41217 278 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 RPS16P62249 146 aaKnown RBP11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 PLGLAQ15195 96 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF468Q5VIY5 522 aaPredicted RBP11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 OR4A16Q8NH70 328 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 RDH5Q92781 318 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 NAT6Q93015 286 aa11.14□□□□□ -0.63
SLC6A1-201ENST00000287766 WDR87Q6ZQQ6 2873 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 H3BMH7 237 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 M0R135 149 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 HS3ST1O14792 307 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 KIR3DL2P43630 455 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 THBS3P49746 956 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 RPL24P83731 157 aaKnown RBP11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 THEM4Q5T1C6 240 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 C9orf40Q8IXQ3 194 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF799Q96GE5 643 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 ALKBH3Q96Q83 286 aaPredicted RBP11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 MDC1Q14676 2089 aaKnown RBP11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 DOCK8Q8NF50 2099 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 GJE1A6NN92 205 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 CDRT15L2A8MXV6 281 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 SPRY1O43609 319 aaPredicted RBP11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 LMX1BO60663 402 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 PATE4P0C8F1 98 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 TMEM183BQ1AE95 376 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 Q6ZN92 141 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 SLC24A4Q8NFF2 622 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 EXTL1Q92935 676 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 ARHGAP5-AS1Q96IT6 56 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 GOLT1BQ9Y3E0 138 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 LIPGQ9Y5X9 500 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 A0A1B0GV90 55 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 VSTM5A8MXK1 200 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 MRPL33O75394 65 aaKnown RBP11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 VSIG10L2P0DP72 767 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 TCN2P20062 427 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 GABRA2P47869 451 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 PKIAP61925 76 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 RAB35Q15286 201 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 DOK3Q7L591 496 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 ASB5Q8WWX0 329 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 TMPRSS13Q9BYE2 586 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 OBP2BQ9NPH6 170 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 PPP1R3CQ9UQK1 317 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 SCN8AQ9UQD0 1980 aa11.13□□□□□ -0.63
SLC6A1-201ENST00000287766 TGFBR3LH3BV60 316 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 BMPR1BO00238 502 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 GSTZ1O43708 216 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 PPP1CBP62140 327 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 CCL7P80098 99 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 INSM1Q01101 510 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 TMEM255AQ5JRV8 349 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 PRR27Q6MZM9 219 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 LINC00469Q8N7U9 141 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR2AE1Q8NHA4 323 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 DTD1Q8TEA8 209 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 B4GALT7Q9UBV7 327 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 COL4A6Q14031 1691 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 A0A096LPE4 126 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 A0A1W2PPZ6 126 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 KIAA1324LA8MWY0 1029 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 ABCD4O14678 606 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 ABHD16AO95870 558 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR3A4PP47883 348 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 ACOT6Q3I5F7 207 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 C11orf42Q8N5U0 333 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 FAM181AQ8N9Y4 354 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 OR10P1Q8NGE3 313 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 EDAQ92838 391 aa11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 UBE2ZQ9H832 354 aaPredicted RBP11.12□□□□□ -0.63
SLC6A1-201ENST00000287766 ZFP64Q9NPA5 681 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms