RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 HGDQ93099 445 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 THYN1Q9P016 225 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 PILRAQ9UKJ1 303 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 DOCK5Q9H7D0 1870 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 A0A0J9YW62 118 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 CDIPTO14735 213 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 NME2P1O60361 137 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 CLDN20P56880 219 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 TLE1Q04724 770 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 ZNF770Q6IQ21 691 aaPredicted RBP16.36■□□□□ 0.21
PCDH1-201ENST00000287008 FAM122CQ6P4D5 195 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 OR2H1Q9GZK4 316 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 TMEM38BQ9NVV0 291 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 A0A0A6YYJ9 748 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 TMEM272A0A1B0GTI8 110 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 RAB19A4D1S5 217 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 PNPP00491 289 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 P2RX3P56373 397 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 BAP18Q8IXM2 172 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 RNF7Q9UBF6 113 aa16.36■□□□□ 0.21
PCDH1-201ENST00000287008 H7BYZ3 331 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 BAK1Q16611 211 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 CTF1Q16619 201 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 CNTD2Q9H8S5 307 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 MTFP1Q9UDX5 166 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 ZNF230Q9UIE0 474 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-201ENST00000287008 FFAR1O14842 300 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 FBP1P09467 338 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 LIMK1P53667 647 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 CDC20Q12834 499 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 PXDC1Q5TGL8 231 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 MOGAT3Q86VF5 341 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-201ENST00000287008 OR5V1Q9UGF6 321 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 ZNF835Q9Y2P0 537 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 IGHV3-43A0A0B4J1X8 118 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 IGKV1-8A0A0C4DH67 115 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 GOSR1O95249 250 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 IGHV3-43DP0DP04 118 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 SLC25A6P12236 298 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 PTHLHP12272 177 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 PMP22Q01453 160 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 BTN1A1Q13410 526 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 TMEM123Q8N131 208 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 TMEM74BQ9NUR3 256 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 HS3ST3B1Q9Y662 390 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 CACNA1HO95180 2353 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 A0A1W2PRD5 423 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 A0A1W2PRF3 423 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 A0A1W2PRM7 423 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 ZNF705GA8MUZ8 300 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-201ENST00000287008 NUDT19A8MXV4 375 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 LY86O95711 162 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 BGLAPP02818 100 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 COL19A1Q14993 1142 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 FAM181AQ8N9Y4 354 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 C10orf35Q96D05 121 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 TMED3Q9Y3Q3 217 aa16.35■□□□□ 0.21
PCDH1-201ENST00000287008 CST7O76096 145 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 NGFRP08138 427 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 ERGP11308 486 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 TGM1P22735 817 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 OR2B8PP59922 312 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 C1orf185Q5T7R7 199 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 TSPO2Q5TGU0 170 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 KPTNQ9Y664 436 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 PYCARD-AS1I3L0S3 204 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 PLPPR5Q32ZL2 321 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 BAGE3Q86Y29 109 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 BAGE2Q86Y30 109 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 ZDHHC22Q8N966 263 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 BPIFCQ8NFQ6 507 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 ADAM19Q9H013 955 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 A0A1W2PQM1 296 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 CELA2AP08217 269 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 ADTRPQ96IZ2 230 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 HEXA-AS1Q9H8Q6 139 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 MRPS18BQ9Y676 258 aaKnown RBP16.34■□□□□ 0.21
PCDH1-201ENST00000287008 J3QT63 122 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 PGA3P0DJD8 388 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 RRASP10301 218 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 CSF2RBP32927 897 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 CRYBB2P43320 205 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 LPAR6P43657 344 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 INSL4Q14641 139 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 P2RY6Q15077 328 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 FAM214BQ7L5A3 538 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 GLCCI1Q86VQ1 547 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 OR4F5Q8NH21 305 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 MAP6Q96JE9 813 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 ZNF385AQ96PM9 386 aaKnown RBP16.34■□□□□ 0.21
PCDH1-201ENST00000287008 OR4F4Q96R69 305 aa16.34■□□□□ 0.21
PCDH1-201ENST00000287008 QSER1Q2KHR3 1735 aa16.33■□□□□ 0.21
PCDH1-201ENST00000287008 A0A1W2PR77 199 aa16.33■□□□□ 0.21
PCDH1-201ENST00000287008 HAGHQ16775 308 aa16.33■□□□□ 0.21
PCDH1-201ENST00000287008 Q56UQ5 140 aa16.33■□□□□ 0.21
PCDH1-201ENST00000287008 SLC25A40Q8TBP6 338 aa16.33■□□□□ 0.21
PCDH1-201ENST00000287008 SCN10AQ9Y5Y9 1956 aa16.33■□□□□ 0.2
PCDH1-201ENST00000287008 ZNF727A8MUV8 499 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms