RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CNOT4O95628 575 aaKnown RBP11.77□□□□□ -0.52
SCAF4-201ENST00000286835 RPL23AP62750 156 aaKnown RBP11.77□□□□□ -0.52
SCAF4-201ENST00000286835 TMEM265A0A087WTH1 108 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 LILRA5A6NI73 299 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 DHRS7CA6NNS2 312 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 CSRP1P21291 193 aaKnown RBP11.77□□□□□ -0.53
SCAF4-201ENST00000286835 PLCXD3Q63HM9 321 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 MRGPRFQ96AM1 343 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 SLC35B3Q9H1N7 401 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 MOB1AQ9H8S9 216 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF286AQ9HBT8 521 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 WIPF3A6NGB9 483 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 LIPT2A6NK58 231 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 AP4M1O00189 453 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 DUSP1P28562 367 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 PPP1CCP36873 323 aaKnown RBP11.77□□□□□ -0.53
SCAF4-201ENST00000286835 RAB11AP62491 216 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 GRB2P62993 217 aaKnown RBP11.77□□□□□ -0.53
SCAF4-201ENST00000286835 MRPS34P82930 218 aaKnown RBP11.77□□□□□ -0.53
SCAF4-201ENST00000286835 ECH1Q13011 328 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 MALLQ13021 153 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 VAX1Q5SQQ9 334 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 CCDC71LQ8N9Z2 235 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 OR11L1Q8NGX0 322 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 OR14L1PQ8NHC6 308 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 IL1F10Q8WWZ1 152 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 NIPSNAP3BQ9BS92 247 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 OR51B6Q9H340 312 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 PARP11Q9NR21 331 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF319Q9P2F9 582 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 CLDN16Q9Y5I7 305 aa11.77□□□□□ -0.53
SCAF4-201ENST00000286835 PQLC2LA1A4F0 135 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 SERPINE3A8MV23 424 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 F8VVB4 439 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 F8VWA3 439 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 NR2C1P13056 603 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 NKX2-1P43699 371 aaPredicted RBP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 GPR137CQ8N3F9 429 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 POC1AQ8NBT0 407 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 UNKLQ9H9P5 680 aaKnown RBP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 DIDO1Q9BTC0 2240 aaKnown RBP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 LDLRAD4O15165 306 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 IGKV3-11P04433 115 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 MSR1P21757 451 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 S100GP29377 79 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 HTR5AP47898 357 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 FBXL14Q8N1E6 418 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 PAPOLGQ9BWT3 736 aaKnown RBP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 PRO1933Q9H354 126 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 GNG13Q9P2W3 67 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 COLCA2A8K830 154 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 RAMP1O60894 148 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 IFNA5P01569 189 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 ALDH3B1P43353 468 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 SUPT4H1P63272 117 aaKnown RBP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 SCGB1C1Q8TD33 95 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 CPNE4Q96A23 557 aaPredicted RBP11.76□□□□□ -0.53
SCAF4-201ENST00000286835 CCDC74BQ96LY2 380 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 RARRES2Q99969 163 aa11.76□□□□□ -0.53
SCAF4-201ENST00000286835 SHANK1Q9Y566 2161 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 HSD17B6O14756 317 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 HLA-HP01893 362 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 MPLP40238 635 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 OR5AS1Q8N127 324 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 LIPGQ9Y5X9 500 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 HLA-GP17693 338 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 NOVA1P51513 510 aaKnown RBP11.75□□□□□ -0.53
SCAF4-201ENST00000286835 HIST2H3PS2Q5TEC6 136 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 LCN15Q6UWW0 184 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 BSCL2Q96G97 398 aaPredicted RBP11.75□□□□□ -0.53
SCAF4-201ENST00000286835 SGCZQ96LD1 299 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 GFOD1Q9NXC2 390 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 ANXA10Q9UJ72 324 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 VCANP13611 3396 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 A0A1W2PQD3 144 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 MBPP02686 304 aaPredicted RBP11.75□□□□□ -0.53
SCAF4-201ENST00000286835 KLK2P20151 261 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 ST3GAL6Q9Y274 331 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 MSTNO14793 375 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 MDKP21741 143 aaPredicted RBP11.75□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF239Q16600 458 aaKnown RBP11.75□□□□□ -0.53
SCAF4-201ENST00000286835 GNRHR2Q96P88 292 aa11.75□□□□□ -0.53
SCAF4-201ENST00000286835 GAR1Q9NY12 217 aaKnown RBP11.75□□□□□ -0.53
SCAF4-201ENST00000286835 PI4KAP42356 2102 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 IGKV1D-8A0A087WSZ0 117 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 CLPSP04118 112 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 MST1LQ2TV78 715 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 SSX9Q7RTT3 188 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 OR10S1Q8NGN2 331 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 OR51H1Q8NH63 302 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 MCTS1Q9ULC4 181 aaKnown RBP11.74□□□□□ -0.53
SCAF4-201ENST00000286835 FBP1P09467 338 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 EPHA8P29322 1005 aaPredicted RBP11.74□□□□□ -0.53
SCAF4-201ENST00000286835 EFNA3P52797 238 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms