RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 OR52M1Q8NGK5 317 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 C19orf12Q9NSK7 152 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 RARRES3Q9UL19 164 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 ZDHHC8Q9ULC8 765 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 SHANK1Q9Y566 2161 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 BCAT2O15382 392 aaPredicted RBP11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 GPR137BO60478 399 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 PRH1P02810 166 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 MT-ND4LP03901 98 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 AFF3P51826 1226 aaKnown RBP11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 ZNF385CQ66K41 422 aaPredicted RBP11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 SLC22A25Q6T423 547 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 HSD17B11Q8NBQ5 300 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 C10orf35Q96D05 121 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 GINS3Q9BRX5 216 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 ULBP2Q9BZM5 246 aa11.52□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A1B0GV50 99 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 G3V3Y1 287 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 TP53I11O14683 189 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 FKBP2P26885 142 aaKnown RBP11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 UCP2P55851 309 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 PIGYQ3MUY2 71 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 RNF212Q495C1 297 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 CDCP2Q5VXM1 449 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 RAET1LQ5VY80 246 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 COMMD1Q8N668 190 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 OR11L1Q8NGX0 322 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 GALNT14Q96FL9 552 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 GNRHR2Q96P88 292 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 SLC2A9Q9NRM0 540 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 HSF4Q9ULV5 492 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 SDK2Q58EX2 2172 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 hCG_1809904A0A1W2PP81 198 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A1W2PR64 198 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A1W2PRV1 198 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 H7C1Q1 480 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 UBE2CO00762 179 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 TOX3O15405 576 aaPredicted RBP11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 ZNF806P0C7X5 589 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 DTYMKP23919 212 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 CHATP28329 748 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 NHLH2Q02577 135 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 FBXW12Q6X9E4 464 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 HPSE2Q8WWQ2 592 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 SPSB1Q96BD6 273 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 C18orf12Q96KH6 178 aa11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 C19orf25Q9UFG5 118 aaPredicted RBP11.51□□□□□ -0.57
SLC28A1-201ENST00000286749 CCDC187A0A096LP49 1063 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 UMAD1C9J7I0 102 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 GEMIN2O14893 280 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 SGCEO43556 437 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 ZNF14P17017 642 aaPredicted RBP11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 AGAP20933 346 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 GUSBP11Q6P575 273 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 ZNF561Q8N587 486 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 SUCNR1Q9BXA5 334 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 FBXO7Q9Y3I1 522 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 SMIM6P0DI80 62 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 DUSP1P28562 367 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 ASCL1P50553 236 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 GPR157Q5UAW9 335 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 PPP1R3BQ86XI6 285 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 MAML2Q8IZL2 1156 aaPredicted RBP11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 CCDC54Q8NEL0 328 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 OR10AD1Q8NGE0 317 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 CD300LFQ8TDQ1 290 aa11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 JSRP1Q96MG2 331 aaPredicted RBP11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 FOXD3Q9UJU5 478 aaPredicted RBP11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
SLC28A1-201ENST00000286749 NSG1A0A0A6YYJ2 146 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A1W2PQM1 296 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 ARG1P05089 322 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 S100A8P05109 93 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 CRYGSP22914 178 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 GLP1RP43220 463 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 NOVA1P51513 510 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 SUCLG1P53597 346 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 FABP9Q0Z7S8 132 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 PDCD1Q15116 288 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 ZNF774Q6NX45 483 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 MSI2Q96DH6 328 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A087WZY1 265 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 IGKV1-12A0A0C4DH73 117 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 IGHV5-10-1A0A0J9YXX1 117 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 ST8SIA3O43173 380 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 PHF1O43189 567 aaPredicted RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 EIF1BO60739 113 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 IGKV1D-12P01611 117 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 S100A9P06702 114 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 CCL3P10147 92 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 RAB5AP20339 215 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 PPP1CCP36873 323 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 CCL7P80098 99 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 CNN3Q15417 329 aaKnown RBP11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 FAM27BQ5VT28 67 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 TMEM182Q6ZP80 229 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms