RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 MED19A0JLT2 244 aaPredicted RBP9.42□□□□□ -0.9
GGPS1-201ENST00000282841 H0YL77 283 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 PRRG2O14669 202 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 TCRBP04435 133 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 CFPP27918 469 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 KRTCAP3Q53RY4 240 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 RPUSD3Q6P087 351 aaKnown RBP9.42□□□□□ -0.9
GGPS1-201ENST00000282841 OR10AD1Q8NGE0 317 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 OR10R2Q8NGX6 335 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 NANPQ8TBE9 248 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ZNF732B4DXR9 585 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 H7C417 338 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 GEMIN2O14893 280 aaKnown RBP9.42□□□□□ -0.9
GGPS1-201ENST00000282841 CTDSPLO15194 276 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 SMPD2O60906 423 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 CALCRP30988 508 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ZP1P60852 638 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 PPP1CBP62140 327 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ZNF260Q3ZCT1 412 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 C17orf78Q8N4C9 275 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ZNF611Q8N823 705 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 OR51S1Q8NGJ8 323 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 KCNG3Q8TAE7 436 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ZCCHC14Q8WYQ9 949 aaKnown RBP9.42□□□□□ -0.9
GGPS1-201ENST00000282841 SPSB4Q96A44 273 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 RAB3CQ96E17 227 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 MTFP1Q9UDX5 166 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ANKRD20A5PA0PJZ0 165 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 SMLR1H3BR10 107 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 M0R1B8 84 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 SYNGR1O43759 233 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 COX5AP20674 150 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 SCGB2B2Q4G0G5 96 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 BAIAP2L2Q6UXY1 529 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 FBXL14Q8N1E6 418 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ST6GAL2Q96JF0 529 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 ST6GALNAC5Q9BVH7 336 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 SLC7A11Q9UPY5 501 aa9.42□□□□□ -0.9
GGPS1-201ENST00000282841 CACNA1DQ01668 2161 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 ANKHD1Q8IWZ3 2542 aaKnown RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 TRGV8A0A0C4DH27 118 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 RHBDL1O75783 438 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 CSTBP04080 98 aaKnown RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 ANXA7P20073 488 aaKnown RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 UCP2P55851 309 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 UBE2MP61081 183 aaKnown RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 TMEM42Q69YG0 159 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 HAGHLQ6PII5 290 aaPredicted RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 UNQ6494/PRO21346Q6UXR6 183 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 DMRTC2Q8IXT2 367 aaPredicted RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 DUSP18Q8NEJ0 188 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 GPX8Q8TED1 209 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 FYTTD1Q96QD9 318 aaKnown RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 FAAP24Q9BTP7 215 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 MSL2Q9HCI7 577 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 NPAP1Q9NZP6 1156 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 KIAA2026Q5HYC2 2103 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 MYO18BQ8IUG5 2567 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 A0A0A6YYJ9 748 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 IGHV1-18A0A0C4DH31 117 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 PMP2P02689 132 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 PSG7Q13046 419 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 PDZK1IP1Q13113 114 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 ARFRP1Q13795 201 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 CNN3Q15417 329 aaKnown RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 ZNF782Q6ZMW2 699 aaPredicted RBP9.41□□□□□ -0.9
GGPS1-201ENST00000282841 C17orf107Q6ZR85 190 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 DPAGT1Q9H3H5 408 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 RGCCQ9H4X1 137 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 GSN-AS1Q9NRJ2 163 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 COA4Q9NYJ1 87 aa9.41□□□□□ -0.9
GGPS1-201ENST00000282841 TFF1P04155 84 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 BCL3P20749 454 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 RPS27AP62979 156 aaKnown RBP9.4□□□□□ -0.9
GGPS1-201ENST00000282841 Q6ZSR3 168 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 LRP11Q86VZ4 500 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 AQP3Q92482 292 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 GTF3AQ92664 365 aaKnown RBP9.4□□□□□ -0.9
GGPS1-201ENST00000282841 MARVELD1Q9BSK0 173 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 CHST6Q9GZX3 395 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 CST11Q9H112 138 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 DUSP13Q9UII6 198 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 SHANK1Q9Y566 2161 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 SVEP1Q4LDE5 3571 aa9.4□□□□□ -0.9
GGPS1-201ENST00000282841 A0A1B0GV90 55 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 UBE2QL1A1L167 161 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 OR5H1A6NKK0 313 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 TMEM127O75204 238 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 RLN1P04808 185 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 LPLP06858 475 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 COX5BP10606 129 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 RAB6AP20340 208 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 SCAND1P57086 179 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 ZNF273Q14593 569 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 MSMPQ1L6U9 139 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 NOXA1Q86UR1 476 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 ZDHHC23Q8IYP9 409 aa9.4□□□□□ -0.91
GGPS1-201ENST00000282841 OR52B4Q8NGK2 314 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms