RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SPRED3Q2MJR0 410 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 TTC32Q5I0X7 151 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 METRNLQ641Q3 311 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PIK3IP1Q96FE7 263 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 RBFOX3A6NFN3 312 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 DHRS7CA6NNS2 312 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 F11P03951 625 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 POLR2IP36954 125 aaKnown RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 RAB9AP51151 201 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM52BQ4KMG9 183 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 CCDC190Q86UF4 302 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 SNX22Q96L94 193 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 DAPP1Q9UN19 280 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 TUBGCP6Q96RT7 1819 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 GSTZ1O43708 216 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 FCGR3BO75015 233 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 TSPAN13O95857 204 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 LBX1P52954 281 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PFN3P60673 137 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 FABP5Q01469 135 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 XKR7Q5GH72 579 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 OR2D3Q8NGH3 330 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 OR10G8Q8NGN5 311 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 ZNF764Q96H86 408 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 FBXL17Q9UF56 701 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 OR51B4Q9Y5P0 310 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 IGHV3-20A0A0C4DH32 117 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 hADV38S2A0JD32 116 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 UBE2L6O14933 153 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 SPRY1O43609 319 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 HAND1O96004 215 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 LYG1Q8N1E2 194 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 ALKBH3Q96Q83 286 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PPIL1Q9Y3C6 166 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 LOXL2Q9Y4K0 774 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 AKR7A2O43488 359 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 B3GALT4O96024 378 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 ALKBH6Q3KRA9 238 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 MRPL43Q8N983 215 aaKnown RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 STXBP6Q8NFX7 210 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 OR5AU1Q8NGC0 362 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 OR2V1Q8NHB1 315 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 TMEM140Q9NV12 185 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 SLCO1C1Q9NYB5 712 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 MBLAC1A4D2B0 266 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 SUCLG1P53597 346 aaKnown RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 GNG3P63215 75 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 FUT7Q11130 342 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 C21orf62-AS1Q17RA5 79 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 GSG1Q2KHT4 349 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 VWA2Q5GFL6 755 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 GPR61Q9BZJ8 451 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 OR2D2Q9H210 308 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PSG11Q9UQ72 335 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 OR5B21A6NL26 309 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PYCARD-AS1I3L0S3 204 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 RNASE1P07998 156 aaKnown RBP7.83□□□□□ -1.16
NIPBL-201ENST00000282516 BRS3P32247 399 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 LPAR6P43657 344 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 C19orf57Q0VDD7 668 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 IL13RA2Q14627 380 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 D2HGDHQ8N465 521 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 FAM131CQ96AQ9 280 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 ELOVL1Q9BW60 279 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PIPOXQ9P0Z9 390 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PCNX2A6NKB5 2137 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 SMPD2O60906 423 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 GJB3O75712 270 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.83□□□□□ -1.161e-6■■■■■ 45.2
NIPBL-201ENST00000282516 MS4A6EQ96DS6 147 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 PPT2Q9UMR5 302 aa7.83□□□□□ -1.16
NIPBL-201ENST00000282516 LIAT1Q6ZQX7 453 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 C10orf126Q8N4M7 172 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 OR10G4Q8NGN3 311 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 OR10G9Q8NGN4 311 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 OR10G7Q8NGN6 311 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 SDF2Q99470 211 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 FGF8P55075 233 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 SLC37A1P57057 533 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 FBXO17Q96EF6 278 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 RAB1BQ9H0U4 201 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 THAP10Q9P2Z0 257 aaPredicted RBP7.82□□□□□ -1.16
NIPBL-201ENST00000282516 PAFAH1B2P68402 229 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 HLA-DRB3P79483 266 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 MRGPREQ86SM8 312 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 C16orf52Q8NHV5 167 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 GABRG3Q99928 467 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 TEX101Q9BY14 249 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 VSIG4Q9Y279 399 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 TAPBPO15533 448 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 COL8A1P27658 744 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 GNG10P50151 68 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 LIMK1P53667 647 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 WNT3P56703 355 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 ISL1P61371 349 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 C11orf91Q3C1V1 193 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 ACSM5Q6NUN0 579 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 ERASQ7Z444 233 aa7.82□□□□□ -1.16
NIPBL-201ENST00000282516 OR13G1Q8NGZ3 307 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms