RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 BORCS7-ASMTA0A0B4J1R7 106 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 A0A1W2PPH5 198 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 A6NLC8 198 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 AMY2BP19961 511 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 Q0VFX4 171 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 ACER2Q5QJU3 275 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF843Q8N446 348 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 FDCSPQ8NFU4 85 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 GPR119Q8TDV5 335 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 TSLPQ969D9 159 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 KLHDC3Q9BQ90 382 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 BCO1Q9HAY6 547 aa9.02□□□□□ -0.96
UPF3B-201ENST00000276201 ZNF71Q9NQZ8 489 aaPredicted RBP9.02□□□□□ -0.96
UPF3B-201ENST00000276201 C14orf166Q9Y224 244 aaKnown RBP9.02□□□□□ -0.96
UPF3B-201ENST00000276201 IGHV1-45A0A0A0MS14 117 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 E5RGE8 158 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 HCRTR2O43614 444 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 P2RY1P47900 373 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 CDX1P47902 265 aaPredicted RBP9.02□□□□□ -0.97
UPF3B-201ENST00000276201 SULT1A1P50225 295 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 TMEM33P57088 247 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 PCOLCEQ15113 449 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 HYAL4Q2M3T9 481 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 GLIPR1L1Q6UWM5 242 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 HEPN1Q6WQI6 88 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 ANKRD37Q7Z713 158 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 LRTM2Q8N967 370 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 MFSD8Q8NHS3 518 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 NICN1Q9BSH3 213 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 TM2D1Q9BX74 207 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 TMEM59Q9BXS4 323 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 TOLLIPQ9H0E2 274 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF700Q9H0M5 742 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 HIPK2Q9H2X6 1198 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 PTGES2Q9H7Z7 377 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF160Q9HCG1 818 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 NSG2Q9Y328 171 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 HDGFL3Q9Y3E1 203 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 EXPH5Q8NEV8 1989 aa9.02□□□□□ -0.97
UPF3B-201ENST00000276201 TNRC6AQ8NDV7 1962 aaKnown RBP9.01□□□□□ -0.97
UPF3B-201ENST00000276201 IGKV3D-11A0A0A0MRZ8 115 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 IGHV3-20A0A0C4DH32 117 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 SERPINE3A8MV23 424 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 MS4A18H0YCH9 400 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 GPR137BO60478 399 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 RAD51DO75771 328 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 IFNA21P01568 189 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 SNRNP70P08621 437 aaKnown RBP9.01□□□□□ -0.97
UPF3B-201ENST00000276201 RBMXP38159 391 aaKnown RBP9.01□□□□□ -0.97
UPF3B-201ENST00000276201 GNALP38405 381 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 OR3A2P47893 321 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 SOX8P57073 446 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 CLINT1Q14677 625 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 MS4A18Q3C1V0 323 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 OR2B11Q5JQS5 317 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 PLPP5Q8NEB5 264 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 FNDC9Q8TBE3 224 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF721Q8TF20 911 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 SLC25A36Q96CQ1 311 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 SLAMF6Q96DU3 332 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 GGACTQ9BVM4 153 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 UNKLQ9H9P5 680 aaKnown RBP9.01□□□□□ -0.97
UPF3B-201ENST00000276201 SPACA1Q9HBV2 294 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 NSG1A0A0A6YYJ2 146 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 BTBD17A6NE02 478 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 CRYM-AS1A6NIL9 109 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 RPL36A-HNRNPH2H7BZ11 118 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 SOCS1O15524 211 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 MPZL1O95297 269 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 CBR1P16152 277 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF20P17024 532 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 PTGER4P35408 488 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 S100A10P60903 97 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 NSDHLQ15738 373 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 IAH1Q2TAA2 248 aaPredicted RBP9.01□□□□□ -0.97
UPF3B-201ENST00000276201 MIDNQ504T8 468 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 ETV3LQ6ZN32 361 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 Q6ZSR3 168 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 CPEB2Q7Z5Q1 589 aaKnown RBP9.01□□□□□ -0.97
UPF3B-201ENST00000276201 ZNF101Q8IZC7 436 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 CCDC54Q8NEL0 328 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 FOXN4Q96NZ1 517 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 GNRHR2Q96P88 292 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 WDR77Q9BQA1 342 aaPredicted RBP9.01□□□□□ -0.97
UPF3B-201ENST00000276201 RTN4RQ9BZR6 473 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 C19orf12Q9NSK7 152 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 PARPBPQ9NWS1 579 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 DOCK10Q96BY6 2186 aa9.01□□□□□ -0.97
UPF3B-201ENST00000276201 PCNX3Q9H6A9 2034 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 A0A1W2PNV4 684 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 CXorf65A6NEN9 183 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 UMAD1C9J7I0 102 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 DDAH2O95865 285 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 MPIG6BO95866 241 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 F10P00742 488 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 CELA2AP08217 269 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 NQO2P16083 231 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 ITGA3P26006 1051 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 CHATP28329 748 aa9□□□□□ -0.97
UPF3B-201ENST00000276201 IL12BP29460 328 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms