RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SRSF4Q08170 494 aaKnown RBP11.79□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF273Q14593 569 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 CNN3Q15417 329 aaKnown RBP11.79□□□□□ -0.52
HMGN3-201ENST00000275036 LRRC36Q1X8D7 754 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 PRR31Q5SQ13 230 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 TMEM200BQ69YZ2 307 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 LDLRAD3Q86YD5 345 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 TMEM86BQ8N661 226 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 DNAAF1Q8NEP3 725 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 OR4M1Q8NGD0 313 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 SSMEM1Q8WWF3 244 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 RDH12Q96NR8 316 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 HHLA2Q9UM44 414 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
HMGN3-201ENST00000275036 POMT1Q9Y6A1 747 aa11.79□□□□□ -0.52
HMGN3-201ENST00000275036 K7N7A8 449 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF737O75373 536 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ZFPL1O95159 310 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 CCL3L1P16619 93 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF20P17024 532 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 PEX2P28328 305 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 SAA4P35542 130 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 RBP2P50120 134 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 UBE2E1P51965 193 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ATP1B3P54709 279 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 GUCA2AQ02747 115 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF691Q5VV52 312 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 EGFL6Q8IUX8 553 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF676Q8N7Q3 588 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ZNF555Q8NEP9 628 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 OR13C3Q8NGS6 347 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 CNIH3Q8TBE1 160 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 C17orf50Q8WW18 174 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 RFT1Q96AA3 541 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 AJUBAQ96IF1 538 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 SPACA5Q96QH8 159 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 PDCD1LG2Q9BQ51 273 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 FGF20Q9NP95 211 aaPredicted RBP11.78□□□□□ -0.52
HMGN3-201ENST00000275036 INPP5EQ9NRR6 644 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 RBFOX1Q9NWB1 397 aaKnown RBP11.78□□□□□ -0.52
HMGN3-201ENST00000275036 ZNRD1Q9P1U0 126 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 MMP24Q9Y5R2 645 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 VWFP04275 2813 aa11.78□□□□□ -0.52
HMGN3-201ENST00000275036 IGKV1-12A0A0C4DH73 117 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 TMEM82A0PJX8 343 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
HMGN3-201ENST00000275036 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 H0YAE9 185 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 IGKV1D-12P01611 117 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 CALCBP10092 127 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 BCL3P20749 454 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 EEF1B2P24534 225 aaKnown RBP11.77□□□□□ -0.53
HMGN3-201ENST00000275036 POU3F4P49335 361 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 GTF2A1P52655 376 aaPredicted RBP11.77□□□□□ -0.53
HMGN3-201ENST00000275036 RAG2P55895 527 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 MTCP1P56278 107 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 KRTAP10-3P60369 221 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 RCN1Q15293 331 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 TAF9Q16594 264 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 KLHL22Q53GT1 634 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 XAF1Q6GPH4 301 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 ASCC1Q8N9N2 400 aaKnown RBP11.77□□□□□ -0.53
HMGN3-201ENST00000275036 OR13C9Q8NGT0 318 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 TBC1D15Q8TC07 691 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 EMG1Q92979 244 aaKnown RBP11.77□□□□□ -0.53
HMGN3-201ENST00000275036 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
HMGN3-201ENST00000275036 OPALINQ96PE5 141 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 JAM3Q9BX67 310 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 FAM234AQ9H0X4 552 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 WNK1Q9H4A3 2382 aa11.77□□□□□ -0.53
HMGN3-201ENST00000275036 TRBV2A0A0J9YWF9 115 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 MEIOCA2RUB1 952 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 POM121CA8CG34 1229 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 ANGPTL7O43827 346 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 GPR137BO60478 399 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 NDUFA7O95182 113 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 CHRM2P08172 466 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 FBP1P09467 338 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 PIPP12273 146 aaPredicted RBP11.76□□□□□ -0.53
HMGN3-201ENST00000275036 PRKACBP22694 351 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 DUSP1P28562 367 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 ETV1P50549 477 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 DLX6P56179 175 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 ADARB1P78563 741 aaKnown RBP11.76□□□□□ -0.53
HMGN3-201ENST00000275036 PDZK1IP1Q13113 114 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 BLMHQ13867 455 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 C17orf107Q6ZR85 190 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 LHFPL2Q6ZUX7 228 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 CYGBQ8WWM9 190 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 RGP1Q92546 391 aaPredicted RBP11.76□□□□□ -0.53
HMGN3-201ENST00000275036 SPSB1Q96BD6 273 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
HMGN3-201ENST00000275036 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms