RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 GEMIN2O14893 280 aaKnown RBP9.61□□□□□ -0.87
MSH3-201ENST00000265081 MRPL33O75394 65 aaKnown RBP9.61□□□□□ -0.87
MSH3-201ENST00000265081 ADAP1O75689 374 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 TRAPPC6AO75865 159 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 GLAP06280 429 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 TMEM225BP0DP42 221 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 CEACAM21Q3KPI0 293 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ABHD17BQ5VST6 288 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 CALHM1Q8IU99 346 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ZNF2Q9BSG1 426 aaPredicted RBP9.61□□□□□ -0.87
MSH3-201ENST00000265081 OR5AC2Q9NZP5 309 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ABI3Q9P2A4 366 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 FARS2O95363 451 aaKnown RBP9.61□□□□□ -0.87
MSH3-201ENST00000265081 PGAM2P15259 253 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 GABRR1P24046 479 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 OR3A2P47893 321 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ARPC4P59998 168 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 PIGYQ3MUY2 71 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 ZNF880Q6PDB4 577 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 TUSC5Q8IXB3 177 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 BHLHE23Q8NDY6 225 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 SUN5Q8TC36 379 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 CASTOR1Q8WTX7 329 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 CRIM1Q9NZV1 1036 aa9.61□□□□□ -0.87
MSH3-201ENST00000265081 DEDDO75618 318 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 DMRTC1Q5HYR2 192 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 KCTD9Q7L273 389 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 INO80EQ8NBZ0 244 aaPredicted RBP9.6□□□□□ -0.87
MSH3-201ENST00000265081 PRRG4Q9BZD6 226 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 KLF13Q9Y2Y9 288 aaPredicted RBP9.6□□□□□ -0.87
MSH3-201ENST00000265081 SESN1Q9Y6P5 492 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 ANGPTL7O43827 346 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 CD82P27701 267 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 ARR3P36575 388 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 RND3P61587 244 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 LPAL2Q16609 132 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 MAFIPQ8WZ33 124 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 STARD10Q9Y365 291 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 MYO7BQ6PIF6 2116 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 FAM230AA0A1W2PPH8 454 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 MSGN1A6NI15 193 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 TAAR5O14804 337 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 PET100P0DJ07 73 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 OR5H8P0DN80 308 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 HKR1P10072 659 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 NUP62P37198 522 aaPredicted RBP9.6□□□□□ -0.87
MSH3-201ENST00000265081 FGF12P61328 243 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 APOBEC3DQ96AK3 386 aaPredicted RBP9.6□□□□□ -0.87
MSH3-201ENST00000265081 LHX6Q9UPM6 363 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 SLC7A11Q9UPY5 501 aa9.6□□□□□ -0.87
MSH3-201ENST00000265081 C14orf166Q9Y224 244 aaKnown RBP9.6□□□□□ -0.87
MSH3-201ENST00000265081 EEF1E1-BLOC1S5C9J1V9 151 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 H7C1Q1 480 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 HTR3BO95264 441 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 SLC9A3R2Q15599 337 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 MST1LQ2TV78 715 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 TMEM268Q5VZI3 342 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 IGF2-ASQ6U949 168 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 IGFL2Q6UWQ7 119 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 MSI2Q96DH6 328 aaKnown RBP9.59□□□□□ -0.87
MSH3-201ENST00000265081 WDYHV1Q96HA8 205 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 CNTNAP3BQ96NU0 1288 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 C1QTNF6Q9BXI9 259 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 CNTNAP3Q9BZ76 1288 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 SLC6A15Q9H2J7 730 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 LDAHQ9H6V9 325 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 NAA60Q9H7X0 242 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 CDRT15L2A8MXV6 281 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 TAF9Q16594 264 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 TMEM164Q5U3C3 297 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 SLC38A6Q8IZM9 456 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 RELL2Q8NC24 303 aaPredicted RBP9.59□□□□□ -0.87
MSH3-201ENST00000265081 SMIM8Q96KF7 97 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 WDFY4Q6ZS81 3184 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 A0A1B0GW55 424 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 GAPDHP04406 335 aaKnown RBP9.59□□□□□ -0.87
MSH3-201ENST00000265081 DUX4L2P0CJ85 424 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 DUX4L3P0CJ86 424 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 DUX4L4P0CJ87 422 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 DUX4L5P0CJ88 424 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 DUX4L6P0CJ89 424 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 DUX4L7P0CJ90 424 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 TPT1P13693 172 aaKnown RBP9.59□□□□□ -0.87
MSH3-201ENST00000265081 FUT3P21217 361 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 LMO1P25800 156 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 MEOX1P50221 254 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 ZNF611Q8N823 705 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 DCUN1D4Q92564 292 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 FER1L6-AS2Q96M78 137 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 CMSS1Q9BQ75 279 aaKnown RBP9.59□□□□□ -0.87
MSH3-201ENST00000265081 SUCNR1Q9BXA5 334 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 PIGMQ9H3S5 423 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 DUX4Q9UBX2 424 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 ST3GAL6Q9Y274 331 aa9.59□□□□□ -0.87
MSH3-201ENST00000265081 TUSC2O75896 110 aa9.58□□□□□ -0.88
MSH3-201ENST00000265081 IL18BPO95998 194 aa9.58□□□□□ -0.88
MSH3-201ENST00000265081 FOXG1P55316 489 aaPredicted RBP9.58□□□□□ -0.88
MSH3-201ENST00000265081 RAB32Q13637 225 aa9.58□□□□□ -0.88
MSH3-201ENST00000265081 MPV17LQ2QL34 196 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms