RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 HSD17B6O14756 317 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 OR2J2O76002 312 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 IFNA1P01562 189 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 HOXB2P14652 356 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 EWSR1Q01844 656 aaKnown RBP eCLIP14.36□□□□□ -0.11
GPC1-201ENST00000264039 ZNF154Q13106 437 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 ZNF684Q5T5D7 378 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 OR13D1Q8NGV5 346 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 RTBDNQ9BSG5 229 aaPredicted RBP14.36□□□□□ -0.11
GPC1-201ENST00000264039 S100GP29377 79 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 PMP22Q01453 160 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 EGR4Q05215 589 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 TNFRSF9Q07011 255 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 KISS1Q15726 138 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 CCDC71LQ8N9Z2 235 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 RSPRY1Q96DX4 576 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 GNRHR2Q96P88 292 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 MYOZ1Q9NP98 299 aaPredicted RBP14.36□□□□□ -0.11
GPC1-201ENST00000264039 KLHL13Q9P2N7 655 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 NLRC5Q86WI3 1866 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 C5orf42Q9H799 3197 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 GUSBP08236 651 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 DRD3P35462 400 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 SUPT4H1P63272 117 aaKnown RBP14.36□□□□□ -0.11
GPC1-201ENST00000264039 TMEM267Q0VDI3 215 aaPredicted RBP14.36□□□□□ -0.11
GPC1-201ENST00000264039 FHL1Q13642 323 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 TEX30Q5JUR7 227 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 ZNF664Q8N3J9 261 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 LHX4Q969G2 390 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 OPN3Q9H1Y3 402 aaPredicted RBP14.36□□□□□ -0.11
GPC1-201ENST00000264039 PIGLQ9Y2B2 252 aa14.36□□□□□ -0.11
GPC1-201ENST00000264039 ZNF320A2RRD8 509 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 VSTM2BA6NLU5 285 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 SERPINE2P07093 398 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 S100A7P31151 101 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 DAP3P51398 398 aaKnown RBP14.35□□□□□ -0.11
GPC1-201ENST00000264039 DYNLT3P51808 116 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 FOXL2P58012 376 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 GABREP78334 506 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 SMAD4Q13485 552 aaKnown RBP14.35□□□□□ -0.11
GPC1-201ENST00000264039 GALNT14Q96FL9 552 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 ZNF845Q96IR2 970 aaPredicted RBP14.35□□□□□ -0.11
GPC1-201ENST00000264039 A0A1W2PNR3 127 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 DHRS7CA6NNS2 312 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 TTRP02766 147 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 GAPDHP04406 335 aaKnown RBP14.35□□□□□ -0.11
GPC1-201ENST00000264039 ZNF43P17038 809 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 HLA-GP17693 338 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 ARL6IP1Q15041 203 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 DBX2Q6ZNG2 339 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 TMEM234Q8WY98 164 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 KLF15Q9UIH9 416 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 ZSWIM8A7E2V4 1837 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 PPIHO43447 177 aaKnown RBP14.35□□□□□ -0.11
GPC1-201ENST00000264039 LCATP04180 440 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 SLC6A8P48029 635 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 HSF1Q00613 529 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 COTL1Q14019 142 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 SGCBQ16585 318 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 TMEM176BQ3YBM2 270 aaPredicted RBP14.35□□□□□ -0.11
GPC1-201ENST00000264039 OR4F5Q8NH21 305 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 BORCS8Q96FH0 119 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 OR4F4Q96R69 305 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 SPIN2AQ99865 258 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 SPIN2BQ9BPZ2 258 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 WFDC1Q9HC57 220 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 FKBP11Q9NYL4 201 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 SUSD2Q9UGT4 822 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 STARD10Q9Y365 291 aa14.35□□□□□ -0.11
GPC1-201ENST00000264039 TLX3O43711 291 aaPredicted RBP14.34□□□□□ -0.11
GPC1-201ENST00000264039 ASAH2BP0C7U1 165 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 TFPI2P48307 235 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 ZNF141Q15928 474 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 NDUFAF3Q9BU61 184 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 PLA2G3Q9NZ20 509 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 KCNS2Q9ULS6 477 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 ARHGAP21Q5T5U3 1957 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 BAGE3Q86Y29 109 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 MRGPRFQ96AM1 343 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 TBX15Q96SF7 602 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 METTL9Q9H1A3 318 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 NECAP2Q9NVZ3 263 aa14.34□□□□□ -0.11
GPC1-201ENST00000264039 NKX2-6A6NCS4 301 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 SERPINA7P05543 415 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 CISD3P0C7P0 127 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 HGFACQ04756 655 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 FHL5Q5TD97 284 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 CNKSR3Q6P9H4 555 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 SSX7Q7RTT5 188 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 SPRED2Q7Z698 418 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 SLC37A2Q8TED4 501 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 BTF3L4Q96K17 158 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 VPS25Q9BRG1 176 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 PCGF1Q9BSM1 259 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 MRPL37Q9BZE1 423 aaKnown RBP14.33□□□□□ -0.11
GPC1-201ENST00000264039 CALHM2Q9HA72 323 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 SCN10AQ9Y5Y9 1956 aa14.33□□□□□ -0.11
GPC1-201ENST00000264039 MASP2O00187 686 aa14.33□□□□□ -0.12
GPC1-201ENST00000264039 ZNF217O75362 1048 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms